Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0653 ATGGAAGCTCCGTTTGTTCTTCCCTCTCCCTCTTTCACTGCTTTCAGGACAAGCAAAGAGCTTCTCCATATGCCATCACTGTTTGAGTTGAAAAGCATAACATGCTTCTCAGTTTGTAGTCAAAAGCAAGATTACAATCGAAAGATGTACATTATACCCATTAGGACTGTTTGTGCTCGGCTTTGCATCGCAAGATCTTCAGTTGGGTCGTTAGAATTTGGTGGGACAGGTCCGCCTAGCAATGCTTATTCAGGATTTTCAGCTTCAAATGACCATCAGAGGGGATTTACAATGTCCCTTGACTCTGCAAGTGACACATTGCACAGAATCAGAGATTTTGAGAGAGAGTTGGAAGAATTATTTGATGAAGTGAAAAGAATGATTAGGATGGGAAACAAAAATGATGCAATAGATCTGCTTAATGCAAATTATGAAGTGGTAAAAGAGCGACTGAACACAGGCACTAAAGGCATAGAAGAAGCTGCTATTTTGGACATCATAGCACTGGGTTACATGGCTGTTGGAGACTTAAAATTTGTTGATTCTCTGTTGAATATGATGAAAGAAGTTGTTGACAATTTGAAGGATGATGCACCACATCTAGATTCAATACTTATGCACATGGGAAGTATGTATGCAACATTGAGCAAGTTTGAAAAATCATTGGACACATATCAAAGGGCTGTCTACATTATGGAGAGGACATATGGTAAGGATAGCACTTTTCTTGTTACACCCTGTTTGGGTATGGCAAAAGTTCTTGGTTCCATTGGAAAAGCAACAACAGCAATAGATATATACCAGCGTGTAATCACTCTCTTGGAATCAAGAAGAGGTGCTGAAAGTAAGGATTTGGTCGTACCTTTACTTAGTCTTGGCAATCTTTTACTGAAAGAAAAAAGAGCCAATGACGCCGAAAGTCATTTTACTAGGGTTCTAAATATATACACCAAATTGTATGGACAAAATGATGGAAAGATTGGAATGGCTATGAGTTCCTTAGCCCAAGTGAAGTGTGCTCAAGGGAAATCAGATGAAGCAATTCATTTGTTTAAACACGCTCTTCAGGTCATGAAGGATTCAAATTACTTGCCACCAGATGACAGTATATTGGAAAAGATGAGGGTAGATCTAGCTGATTTACTTCATGCTGTGGGGAGAGGGAAAGAAGGCAGAGAGCTTTTAGAGGAGTGCTTATTGATCACTGAGAGGTACAAAGGAAAGGAGCACCCCAGTTTAGTGACACACATGGTAAATCTTGCAACTTCATATTCACGGTCAAAGAATTATGCGGAGGCTGAGCACTTGCTGAGAAGAAGTTTGCAAATTATGATAAAGCATAAGGGAACTGATGACCCGTCCATCAGCTTTCCTATGTTGCACCTTGCAGTTACACTCTACCATTTGAAACAAGATGAAGAAGCTGAGAAATTTGCTCTGGAAGTTTTGCACCTCCGTGAGAAGGCATTTGGAGAAGATTCTCTTCCTGTTGGAGAGGCTTTGGACTGTTTGGTGTCTATACAAACCAGACTTGGTAAGGATGACAATGAGTTACTCAAGCTGCTTAGAAGGATCCTGAATATCCAAGAGAAAGAATTTGGATATGAGAGTGAGGAGGTTTTGGTTACCCTGAACAAAATTGTATACTACTTGGATAAATTAGGGAGAAAAGATGAAAAGCTTCCCCTACAGAGAAGGTTGTCTCTGCTTAGGAAGAAATATAAGCAGATGGTTCATCACTAA 1743 0.3999 MEAPFVLPSPSFTAFRTSKELLHMPSLFELKSITCFSVCSQKQDYNRKMYIIPIRTVCARLCIARSSVGSLEFGGTGPPSNAYSGFSASNDHQRGFTMSLDSASDTLHRIRDFERELEELFDEVKRMIRMGNKNDAIDLLNANYEVVKERLNTGTKGIEEAAILDIIALGYMAVGDLKFVDSLLNMMKEVVDNLKDDAPHLDSILMHMGSMYATLSKFEKSLDTYQRAVYIMERTYGKDSTFLVTPCLGMAKVLGSIGKATTAIDIYQRVITLLESRRGAESKDLVVPLLSLGNLLLKEKRANDAESHFTRVLNIYTKLYGQNDGKIGMAMSSLAQVKCAQGKSDEAIHLFKHALQVMKDSNYLPPDDSILEKMRVDLADLLHAVGRGKEGRELLEECLLITERYKGKEHPSLVTHMVNLATSYSRSKNYAEAEHLLRRSLQIMIKHKGTDDPSISFPMLHLAVTLYHLKQDEEAEKFALEVLHLREKAFGEDSLPVGEALDCLVSIQTRLGKDDNELLKLLRRILNIQEKEFGYESEEVLVTLNKIVYYLDKLGRKDEKLPLQRRLSLLRKKYKQMVHH* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0653 580 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) 114 565 - -
Apr1g0653 580 SUPERFAMILY TPR-like 127 273 IPR011990 GO:0005515
Apr1g0653 580 Coils Coil 103 130 - -
Apr1g0653 580 SUPERFAMILY TPR-like 263 485 IPR011990 GO:0005515
Apr1g0653 580 Pfam MalT-like TPR region 199 485 IPR041617 -
Apr1g0653 580 Gene3D Tetratricopeptide repeat domain 365 576 IPR011990 GO:0005515
Apr1g0653 580 ProSiteProfiles TPR repeat profile. 202 235 IPR019734 GO:0005515
Apr1g0653 580 Gene3D Tetratricopeptide repeat domain 168 364 IPR011990 GO:0005515
Apr1g0653 580 SMART tpr_5 202 235 IPR019734 GO:0005515
Apr1g0653 580 SMART tpr_5 286 319 IPR019734 GO:0005515
Apr1g0653 580 SMART tpr_5 328 361 IPR019734 GO:0005515
Apr1g0653 580 SMART tpr_5 244 277 IPR019734 GO:0005515
Apr1g0653 580 SMART tpr_5 414 447 IPR019734 GO:0005515
Apr1g0653 580 SMART tpr_5 456 489 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0653 - - aprc:113852595 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0653 1 7820628 7825604 Apr1g0653 1 7820628 7825604 ECH