Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0648 ATGTCAATGGAAGTAACGCAGGTGCTTTTGAATGCTCAATCAATCGATGGGACTGTAAGGAAGCATGCTGAAGATAGTCTGCGACAATTTCAGGAGCAAAACCTTCCTGGATTCTTGGTCTCTCTTTCTGGGGAGCTAGCAAGTGAAGATAAACCAGTTGATAGCCGAAAATTGGCAGGTTTGATACTCAAGAATGCTTTGGATGCCAAGGATGAAAACAGAAAGCGGGAATTGGTCCAAAGATGGTTGTCACTGGATCCTGTGGCAAAGACCCAAATTAAGTCATGCTTGTTGCAAACACTGTCGTCTCTTGTACCTGATGCTCGGTCTACATCAACACAAGTTATTGCTAAAATTGCTGGAATTGAGCTTCCTCAAAAACAGTGGCCTGAGCTGATAGGGTCACTTTTATCAAATATTCATCAAGTACCTACTCATGTCAAGCAAGCAACTTTGGAAACTCTGGGGTATCTGTGTGAAGAAGTATCTCCTCAGGTTGTTGATCAAGACCAAGTAAATAAAATACTTACTGCTGTAGTTCAGGGTATGAATGGGTCTGAAGGGAATAATGATGTTAGGCTTGCTGCTACTAGGGCATTATATAATGCTCTTGGGTTTGCTCAGGCTAATTTTAGCAATGATATGGAGCGTGATTATATCATGAGAGTTGTTTGTGAGACAACTATGTCCCCCGAAGTGAAAATAAGACAGGCAGCTTTTGAATGTTTGGTCTCAATTGCAGCCATGTATTATGAGAAATTGGCTCCTTATATCCAGGACATATATAACATTACTGCAAAGGCTGTTAGGGGTGATGAGGAACCTGTTGCTCTTCAAGCCATTGAATTTTGGAGTACAATTTGTGATGAGGAGACTGATATCTTGGAAGAATATGTGGGTGATTCCAGTGGAGACTCTGAAATACCTTGTTTTTATTTTATTAAGCAAGCTCTTCCTGCACTTATACCTCTGCTGTTGGAAACATTACTCAAACAAGAAGAGGATCAGGATCTGGACGAAGGTGCATGGAATATTGCAATGGCAGGTGGTACGTGCCTTGGTTTAGTTGCTCGTACTGTTGGAGATGATATTGTGCCACTGGTAATGCCCTTCATTGAGGAGAATATTACAAAACCGGATTGGAGACAAAGGGAGGCAGCCTCTTATGCTTTTGGATCTATTTTGGAGGGGCCTTCCCCAGACAAATTAGCTCCTCTTGTTAATCATGCATTACCATTTATGCTTAGTGCTTTAGTGAAGGACCCAAACAACCATGTGAAAGACACCACTGCTTGGACTTTGGGACGGATGTTTGAATTTCTTCACAGTTCAATTGTAGGTACACCCATTATTAATGAAGGAAATTGCCAACAGATTATTACAGTTCTCCTTCAGAGCATGAAGGATGTTCCAAATGTTGCTGAGAAGGCTTGTGGTGCTCTGTATTTTCTTGCCCAGGGTTATGAGGATGTTGGACCAGCATCTCCTCTAACTCCCTTTTTCCAGGAAATTGTTCAATCCCTTCTCACGGTTACCCACAGAGAGGATGCTACAGAATCACGCTTGAGAACTGCGGCATATGAAACATTGAATGAAGTAGTAAGGTGTTCAACAGATGAAACAGCTCCTTTGGTGTTACAACTAGTTTCTGTCATCATGATGGAGCTGCACAAATGTCTTGAAGCACAAAATCTTTCATCTGAAGAAAGAGAAAAGCAGAGTGAATTGATAGGTCTTCTTTGTGGGTGCTTGCAAGTAATTATTCAGAAGTTAGGATCTTCAGAACCTACCAAATATGTCTTCTTGCAGTATTCTGATCAGATAATGGGACTATTCTTCAGGGTCTTTGCTTGTAGAAATGCCACTGCACATGAGGAGGCCATGCTAGCCATTGGAGCCCTTGCCTATGTGATTGGCCCTGATTTTGCCAAGTACATGCCTGAATTTTACCCGTTTCTGGAGATGGGCCTTCAGAATTTTGAGGAGTACCAAGTATGTGCTGTGACTGTTGGTGTTGTAGGGGACATATGCAGGGCATTGGAGGATAAAATACTGCCTTACTGCGATGGGATTATGACACAACTTCTCAAGAATTTGTCTAGTGATAATTTGCACCGCTCTGTAAAGCCCCCGTTATTTTCATGCATTGGTGATATAGCTCTTGCAATAGGAGATAACTTCAATAAATACTTAATGTATGCTATGAACACACTACAGCTTGCTGCAGAGATGTATGCCCATACATCAGGTTTTGATGATGAAATGACTGAGTACATTAATTCTTTGAGAAATGGGATATTAGAGGCATATTCTGGGATTTTCCAAGGGTTTAAGAATTCATCAAAAACACAGCTCTTGATTCCTTATGCTCCTCACATTCTCCAATTCTTGGATAGCATATACATGGAAAAAGACATGGACGAAGTGGTTATGAAAACTGCAATTGGAGTCCTTGGAGATCTAGCAGATACACTTGGAAGCAATGCTGGTTCTTTAATACAGCAGTCTTTGTCAAGCAGAGAATTTTTAAATGAATGTTTGACCTCAGAAGATCATTTGATTAAAGAATCTGCTGAATGGGCCAAGTTGGCTATCAATCGTGCTATATCTGTTTGA 2616 0.4113 MSMEVTQVLLNAQSIDGTVRKHAEDSLRQFQEQNLPGFLVSLSGELASEDKPVDSRKLAGLILKNALDAKDENRKRELVQRWLSLDPVAKTQIKSCLLQTLSSLVPDARSTSTQVIAKIAGIELPQKQWPELIGSLLSNIHQVPTHVKQATLETLGYLCEEVSPQVVDQDQVNKILTAVVQGMNGSEGNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCETTMSPEVKIRQAAFECLVSIAAMYYEKLAPYIQDIYNITAKAVRGDEEPVALQAIEFWSTICDEETDILEEYVGDSSGDSEIPCFYFIKQALPALIPLLLETLLKQEEDQDLDEGAWNIAMAGGTCLGLVARTVGDDIVPLVMPFIEENITKPDWRQREAASYAFGSILEGPSPDKLAPLVNHALPFMLSALVKDPNNHVKDTTAWTLGRMFEFLHSSIVGTPIINEGNCQQIITVLLQSMKDVPNVAEKACGALYFLAQGYEDVGPASPLTPFFQEIVQSLLTVTHREDATESRLRTAAYETLNEVVRCSTDETAPLVLQLVSVIMMELHKCLEAQNLSSEEREKQSELIGLLCGCLQVIIQKLGSSEPTKYVFLQYSDQIMGLFFRVFACRNATAHEEAMLAIGALAYVIGPDFAKYMPEFYPFLEMGLQNFEEYQVCAVTVGVVGDICRALEDKILPYCDGIMTQLLKNLSSDNLHRSVKPPLFSCIGDIALAIGDNFNKYLMYAMNTLQLAAEMYAHTSGFDDEMTEYINSLRNGILEAYSGIFQGFKNSSKTQLLIPYAPHILQFLDSIYMEKDMDEVVMKTAIGVLGDLADTLGSNAGSLIQQSLSSREFLNECLTSEDHLIKESAEWAKLAINRAISV* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0648 871 SUPERFAMILY ARM repeat 3 861 IPR016024 -
Apr1g0648 871 Pfam HEAT-like repeat 381 437 - -
Apr1g0648 871 PANTHER IMPORTIN SUBUNIT BETA-1 3 869 IPR027140 GO:0006913
Apr1g0648 871 Gene3D - 1 871 IPR011989 -
Apr1g0648 871 SMART IBN_N_2 23 103 IPR001494 GO:0006886|GO:0031267
Apr1g0648 871 PANTHER IMPORTIN BETA 3 869 IPR040122 GO:0006606
Apr1g0648 871 Pfam Importin-beta N-terminal domain 23 102 IPR001494 GO:0006886|GO:0031267
Apr1g0648 871 ProSiteProfiles Importin-beta N-terminal domain profile. 23 103 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0648 Apr-Chr1 7788823 7793654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0648 K14293 - gmx:100785130 1618.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0648 1 7788823 7793654 Apr1g0648 1 7788823 7793654 ECH