Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0646 ATGGCCAACGTTTCAATTCCACTCCCAAGAAACGCTTTCTCAATTCCCAATTGCTCAACCAAACGCCCTTCTTTCACCCCTTCTCCTTCAACTCTCAGAATTTCTTGCTCTGGAGTAGCTGAGTTAGATGGATCTCAAAATAAGGGAATCAAGGGCATGGCCTGTGGTATTCTTGCAGCTATCACTGTTACTTCTGCTACATTTCCCCTTATGGCTGCTACTCAGAGACTTCCCCCATTGTCAACTGAACCCAATCGGTGCGAGCGTGCATTTATTGGCAACACAATTGGTCAGGCAAATGGTGTATATGACAAACCATTAGATCTCCGGCTTTGTGATTTCACAAATGAAAAATCCAACTTGAAGGGGAAATCCCTCTCTGCAGCACTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACAGAAGTTGTGATGTCAAAGGCTTATGCTGTTGGCGCCAGCTTTAAAGGGGTGGACTTCTCAAATGCAGTCTTGGACCGTGTGAACTTTGGGAAAGCTGATCTTGAAGGAGCCGTATTTAGGAACACAGTATTGTCGGGCTCCACGTTTGATGATGCTAAGCTGGACAATGCAGTTTTTGAGGACACTATCATTGGCTACATTGATCTCCAGAAGCTATGCACAAACAAGACAATCGGTGCTGAAGGGAGGGCTGAACTTGGATGTCGATAA 696 0.454 MANVSIPLPRNAFSIPNCSTKRPSFTPSPSTLRISCSGVAELDGSQNKGIKGMACGILAAITVTSATFPLMAATQRLPPLSTEPNRCERAFIGNTIGQANGVYDKPLDLRLCDFTNEKSNLKGKSLSAALMSDAKFDGADMTEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKADLEGAVFRNTVLSGSTFDDAKLDNAVFEDTIIGYIDLQKLCTNKTIGAEGRAELGCR* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0646 231 Pfam Pentapeptide repeats (8 copies) 126 163 IPR001646 -
Apr1g0646 231 Pfam Pentapeptide repeats (8 copies) 166 203 IPR001646 -
Apr1g0646 231 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 231 - -
Apr1g0646 231 PANTHER THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC 1 231 IPR044195 -
Apr1g0646 231 SUPERFAMILY Pentapeptide repeat-like 110 213 - -
Apr1g0646 231 Gene3D - 105 231 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0646 - - aprc:113846743 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0646 1 7770613 7773709 Apr1g0646 1 7770613 7773709 ECH