Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0630 ATGGGTACTATAAGCAACGAAGAACTCGAAGAGATTCAGAGTGTCGACAGAGAGGACATTGAGGAGATTCCAGTTGTGCCTCAGGATGTGAGTAGAATAGCACCATGGCCAAGACAGATTACGATTAGGGGACTAATAGCTAGCTTTCTGATTGGAATAATTTATAGTGTGATTGTGATGAAGCTCAACCTCACTACTGGATTAGTCCCTAATCTCAATGTTTCAGCTGCTCTCCTTGGCTTTGTGTTCATTCGAGCTTGGACTAAGGTGCTTGAAAGAGCCAAAATTGTTCCCACTCCATTCACTAGACAGGAGAATACCATAATCCAGACTTGTGCTGTTGCTTGTTATAGCATCGCGGTAGGAGGTGGTTTTGGGTCTTATCTCTTGGGGTTGAATAGGAGGACTTATGAGCAAGCAGGGGTTGATACGGAGGGGAACAATCCTGGTAGTACCAAGGAGCCTGGAATTGCATGGATGTTAGCTTTTCTCTTTGTCACCAGCTTTGTTGGGCTATTGGCGTTGGTCCCCATTAGAAAGATCATGATAATAGACTACAAATTAACTTATCCTAGTGGAACTGCTACTGCTGTTCTCATTAACGGGTTCCATACTCCTAAAGGAGATGTGATGGCCAAGAAGCAAGTTCATGGTTTCTTGAAGTTCTTCTCAGCCAGTTTCATTTGGGCTTTCTTTCAATGGTTCTATACGGGAGGGAATAATTGTGGATTTGTTCAGTTCCCTACTTTTGGATTGAAAGCATGGAAGAACTCCATGACTTACGTTGGAGCAGGAATGATTTGTTCCCATCTAGTAAATTTATCCTTGCTTCTTGGTGCTGTGATTTCATGGGGCATTATGTGGCCTTTAATCAGGGGACTAAAAGGAGAATGGTTCCCTGCAAGTATACCAGAAAGTAGCATGAAGAGTCTTAATGGCTATAAGGTTTTTATTTCCATTGCCTTGATTCTTGGTGATGGGCTATACAATTTTGTCAAAGTTCTCTATTTCACTGCCACAAATATCCATGCCACTGTGAAAAAGAAGAATCTTAATACATTTTCAGAGAACCAGAGACAATTGCCTCATGATGACCTTAGACGGAATGAAGTGTTTGCAAGAGAAAACATTCCTATATGGTTGGCATGTACAGGATACATATTCTTTGCCATCATTTCTATCATTGTAATCCCTTTGATGTTCCCCCAGTTGAAGTGGTACTACGTGGTGTTTGCCTATATTTTTGCACCCTCTCTTGGCTTCTGCAATGCTTATGGAGCTGGCTTAACTGACATGAACATGGCCTATAACTATGGGAAAGTGGCTCTCTTTGTGCTTGCAGCCTTAGCTGGAAAAAGTGATGGTGTAGTTGCTGGGCTTGTGGGGTGTGGCCTGATTAAATCTATTGTTTCTATTTCATCTGATTTGATGCATGATTTCAAAACTGGTCACCTTACTTTCACTTCCCCTCGTTCAATGCTTTTAGGCCAAGCTATTGGGACAGCAATAGGTTGTGTTGTTGCTCCTTTTACATTCTTTCTTTTCTACAAGGCTTTTGATGTAGGGAATCCTGATGGGGAATATAAGGCCCCATATGCCATCATATACAGAAACATGGCAATTCTTGGTGTAGAAGGCTTTTCTGCCCTTCCCCACCATTGCTTGCAACTCTGTTATGGTTTTTTTGCATTTGCTATAGCAGCCAACTTGGTCAGAGATCTTAGCCCAAAAAATGTTGGGAGATGGATTCCACTTCCAATGGCAATGGCTGTCCCTTTCCTTGTTGGTGGTTACTTTGCCATTGACATGTGTGTGGGTAGTTTGATTGTGTTTACCTGGCACAAACTAAACAAAAATGAGGCAAGTTTGATGGTTCCTGCAGTTGCTTCTGGTTTGATTTGTGGAGATGGATTATGGATTCTCCCTTCATCCATTCTTGCTCTGTTAAAAGTTAGTCCCCCAATATGCATGAGCTTTTTGTCTACCAGTTAG 1992 0.4202 MGTISNEELEEIQSVDREDIEEIPVVPQDVSRIAPWPRQITIRGLIASFLIGIIYSVIVMKLNLTTGLVPNLNVSAALLGFVFIRAWTKVLERAKIVPTPFTRQENTIIQTCAVACYSIAVGGGFGSYLLGLNRRTYEQAGVDTEGNNPGSTKEPGIAWMLAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATAVLINGFHTPKGDVMAKKQVHGFLKFFSASFIWAFFQWFYTGGNNCGFVQFPTFGLKAWKNSMTYVGAGMICSHLVNLSLLLGAVISWGIMWPLIRGLKGEWFPASIPESSMKSLNGYKVFISIALILGDGLYNFVKVLYFTATNIHATVKKKNLNTFSENQRQLPHDDLRRNEVFARENIPIWLACTGYIFFAIISIIVIPLMFPQLKWYYVVFAYIFAPSLGFCNAYGAGLTDMNMAYNYGKVALFVLAALAGKSDGVVAGLVGCGLIKSIVSISSDLMHDFKTGHLTFTSPRSMLLGQAIGTAIGCVVAPFTFFLFYKAFDVGNPDGEYKAPYAIIYRNMAILGVEGFSALPHHCLQLCYGFFAFAIAANLVRDLSPKNVGRWIPLPMAMAVPFLVGGYFAIDMCVGSLIVFTWHKLNKNEASLMVPAVASGLICGDGLWILPSSILALLKVSPPICMSFLSTS* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0630 663 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 33 643 IPR004813 GO:0035673
Apr1g0630 663 Pfam OPT oligopeptide transporter protein 39 646 IPR004813 GO:0035673
Apr1g0630 663 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL3 7 661 - -
Apr1g0630 663 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 7 661 IPR045035 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0630 Apr-Chr1 7588215 7592124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0630 - - gmx:100795669 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0630 1 7588215 7592124 Apr1g0630 1 7588215 7592124 ECH