Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0626 ATGGCCTACACCCAATCCCTTTTCCTCTCTAACTCTCTCCCATTCCCATTCGCATCACTCCCAAACCCCAAACTCCATCATCCACCCTCCACTCATCTCTTCTTTCGCCCCCTCACTTTTCAAGCGCTTCGCGTGAAACCCCACGTGCCTGTTTCCCCGCTCAAAGCGTCAATGGCAGGGACCAAAAACGTTACTTTCGAGGTCTTCGAAAAAGACGACCTTGCCGTCTCTCTAGCCAAATACGTCGCCGATCTCTCTAATAAGTTCACCTCTCAAAGAGGGGCTTTCACCGTTTGCTTGTCTGGTGGCTCGTTGATTCACTATCTCCGTAAATTGCTGGAAGCTCCTTATGTTGATTCTCTTGAATGGGCCAAATGGCACGTGTTTTGGGTCGATGAGAGAGTCGTGCCAAAGACTCATGAAGATAGTAATTACAAGCTTGCTTTTGATGGATTTCTCTCCAAGGTGCCAATTCCACCGGGTAATGTTTATGCAATTAATGATGCACTGTCAGCTGAGGGAGCGGCCGATGATTATGAGACTTGTCTCAAACACTTGGTCAAGAGCAATGTGATAGCTTTATCATCAGCCACTGGATTTCCAAAATTTGATCTCATGCTGCTGGGCATGGGTCCCGATGGGCATGTAGCTTCTTTGTTCCCGGGGCATCCTCTTGTGCAGGAGAATGAGAAATGGGTTACATTCATTAAGGACTCACCCAAACCACCACCAGAGAGAATAACATTCACCTTTCCAGTGATTAATTCTTCTGCTTATGCTGCACTTGTGGTGACTGGTAGTGGTAAAACTGATGCAGTTCATTCTGTATTAGGCGATTCTCAAAATTCTGTTAAGCTTCCTGCTGCATTGGTTGCACCTGAAGGGGAGTTAAAATGGTTCCTAGACAAAGGTGCAGCCTCAAAGCTGTAG 930 0.4688 MAYTQSLFLSNSLPFPFASLPNPKLHHPPSTHLFFRPLTFQALRVKPHVPVSPLKASMAGTKNVTFEVFEKDDLAVSLAKYVADLSNKFTSQRGAFTVCLSGGSLIHYLRKLLEAPYVDSLEWAKWHVFWVDERVVPKTHEDSNYKLAFDGFLSKVPIPPGNVYAINDALSAEGAADDYETCLKHLVKSNVIALSSATGFPKFDLMLLGMGPDGHVASLFPGHPLVQENEKWVTFIKDSPKPPPERITFTFPVINSSAYAALVVTGSGKTDAVHSVLGDSQNSVKLPAALVAPEGELKWFLDKGAASKL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0626 309 PANTHER 6-PHOSPHOGLUCONOLACTONASE 58 309 IPR039104 -
Apr1g0626 309 TIGRFAM pgl: 6-phosphogluconolactonase 70 309 IPR005900 GO:0005975|GO:0006098|GO:0017057
Apr1g0626 309 SUPERFAMILY NagB/RpiA/CoA transferase-like 71 309 IPR037171 -
Apr1g0626 309 Pfam Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 71 299 IPR006148 GO:0005975
Apr1g0626 309 Gene3D - 67 309 - -
Apr1g0626 309 PANTHER 6-PHOSPHOGLUCONOLACTONASE 3, CHLOROPLASTIC 58 309 - -
Apr1g0626 309 CDD 6PGL 72 301 IPR005900 GO:0005975|GO:0006098|GO:0017057
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0626 Apr-Chr1 7552390 7557478 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0626 K01057 - gmx:100794078 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0626 1 7552390 7557478 Apr1g0626 1 7552390 7557478 ECH