Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0618 ATGTTCAACGGTGATCCTTCATTCCCCCCTGTCCCTACCCTTACCACCGAGCAGATTCAAAAGTACTTGGAGGAGAATAAGGAGCTGATCCTGGCAATTATGGAATGTCAAAGACTCGGAAAGTTCGCTGAGATTGCACAATATCAAGCAAAGCTTCAGCACAACTTGACTTTTCTAGCCAAACTTGCGGATGCAGGGCCTCAAGCTATGCAACAGGGGCAAGGCATGCAGCAACCTCATATTCCAGTGTCTCAGCCACAACCAGATCACTCTATCATGAACTTGACCTTGGATATAAATGATCAGCAACAGCATCTTGGAACATCTCTACATCAACCTGATATTTCTACTTCAAAGTTGCCTTTTCAGATGAATGAACAGAACCATAAGGTGCCATCTTTCTTCCAACAACACCAACTTATCCCTGGACAAATGGGTAGCTTTCCTGCAAACAATAGTGGCATATATCAGATTCAGGGATCTCAAACAAGACTTGGCAATAGCTCAGATACGCCATCAAACAACCAGATTGGCTCAGATTTTGGTCCTTGGTCTTAA 558 0.4391 MFNGDPSFPPVPTLTTEQIQKYLEENKELILAIMECQRLGKFAEIAQYQAKLQHNLTFLAKLADAGPQAMQQGQGMQQPHIPVSQPQPDHSIMNLTLDINDQQQHLGTSLHQPDISTSKLPFQMNEQNHKVPSFFQQHQLIPGQMGSFPANNSGIYQIQGSQTRLGNSSDTPSNNQIGSDFGPWS* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0618 185 Pfam SSXT protein (N-terminal region) 13 68 IPR007726 -
Apr1g0618 185 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 6 183 IPR044779 GO:0003713
Apr1g0618 185 PANTHER TRANSCRIPTION FACTOR SSXT FAMILY-RELATED 6 183 - -
Apr1g0618 185 MobiDBLite consensus disorder prediction 162 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0618 Apr-Chr1 7460949 7463412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0618 - - ccaj:109816259 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0618 1 7460949 7463412 Apr1g0618 1 7460949 7463412 ECH