Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0601 ATGTCTAAAATCGAAATAAAATCTCCGAAGGACTGTGCTAGCAAGCAAGGACTGAGAATTGAGAGGAACTACAAGAAGCTCTTCTTTGCTTTCTCAGCATTTTTCACCTCAATCCTATTACTAATACTTCTTATCTGGCTCATCCTCCACCCTGCAAAGCCTCAATTCTCCCTCAAAGAAGTTGATATCTACCAGCTGAACCTTTCAGGACCAAGCCTCAACTCCTCCATCCAACTCACTCTTCTCTCCAAAAATCCAAATCAGAAAGTTGGCATTTACTATGATGAGTTTCAAGTTTATGCAACCTACAAGGGCCAACAGATAACTGGTGATACCCCAGTTCCTCCCTTCTACCAAGGCCAAGAAGAGAGTAATCTCTTAACAGCATCTTTGGTAGGAAATGGGTTACCAGTTGCACCCTCTCTTAGTTATGAAGTGGGTCGTGATCAAACTATTGGAAGACTAGTTTTGAATCTCAAAGTTATTGGGAAGCTTCGTTGGAAGGTGGGAACTTGGGTCTCTGGACGTTACAGGTTCAATGTTAATTGTTTTACTATCATGGCCTTTGGACCCTCTATGCCTGCAGGTCCTCTTACTTCAAACCAAGGGGCTCAGTGTTCTACCACAATTTAA 633 0.425 MSKIEIKSPKDCASKQGLRIERNYKKLFFAFSAFFTSILLLILLIWLILHPAKPQFSLKEVDIYQLNLSGPSLNSSIQLTLLSKNPNQKVGIYYDEFQVYATYKGQQITGDTPVPPFYQGQEESNLLTASLVGNGLPVAPSLSYEVGRDQTIGRLVLNLKVIGKLRWKVGTWVSGRYRFNVNCFTIMAFGPSMPAGPLTSNQGAQCSTTI* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0601 210 Pfam Late embryogenesis abundant protein 80 183 IPR004864 -
Apr1g0601 210 PANTHER BNAA02G10130D PROTEIN 14 210 - -
Apr1g0601 210 PANTHER OS05G0367900 PROTEIN 14 210 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0601 Apr-Chr1 7255795 7257349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0601 27 183 EF-hand Containing Proteins AT5G21130 23.602 4.01e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0601 - - gmx:100783857 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0601 1 7255795 7257349 Apr1g0601 1 7255795 7257349 ECH