Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0596 ATGGACACAAAGGTTCTCTCTTCCGGAACCCAGTACTCAAATTTGCCAGAGAGTTATATCCGACCCGAATCCGAACGACCTCGTCTTTCTGAAGTGTTGGAGTGTGTAGATGTTCCTATCATCGATTTGGGTTCTCAAAACAGAACCCAGATTGTACACCAAATCGGTGAAGCCTGTAGGCTCTATGGCTTTTTCCAGGTGATTAATCACGGGGTGTCACTAGAAGCAGTGAAGGAAATGGCAGAGGTGGCATATGAGTTCTTCAGGTTGCCGGTGGAGGAGAAGTTGAAGTTGTACTCAGAAGACCCGTCAAAGACAATGAGACTATCAACTAGTTTTAATGTGAACAAAGAAACGGTGCATAACTGGAGAGATTATCTTAGGCTTCATTGCTATCCTTTGGAGAAGTATGTGTCTGAATGGCCATGTAATCCACCATCCTTCAAGGAAACTGTGACACAATACTGCAAAGAAGTTCGGGAATTGGGATTGAGAATACAAGAATATATATCAGAGAGTTTGGGTCTAGAAAAAGATTACATAAAGGATGTTTTGGGGGAACAAGGGCAGCACATGGCAGTGAACTATTATCCACCATGCCCAGAACCAGAACTTACCTATGGATTGCCAGGGCACACAGACCCAAATGCACTTACAATTTTGCTCCAAGATTTGCATGTTTCTGGCCTTCAAGTTCTCAAAGATGGCAAATGGCTTGCCGTTCGTCCACAACCTGATGCCTTTGTTATTAACATAGGCGATCAAGTGCAGGCTTTGAGTAATGGCCTTTATAGAAGTGTCTGGCACCGGGCTGTTGTAAATGCTGAGAAGCCCAGACTTTCTGTGGCTTCATTTCTTTGCCCAAATGATGAGGCATTGATAAGCCCTGCGAAACCACTCACAGAAGATGAATCTGGAGCCATTTATCGAGGATTTACATATGCAGAATACTACAAGAAGTTCTGGAGTAGGAACCTAGACCAAGAACACTGTTTGGAACTTTTCAAGAACAAGTAG 1017 0.4366 MDTKVLSSGTQYSNLPESYIRPESERPRLSEVLECVDVPIIDLGSQNRTQIVHQIGEACRLYGFFQVINHGVSLEAVKEMAEVAYEFFRLPVEEKLKLYSEDPSKTMRLSTSFNVNKETVHNWRDYLRLHCYPLEKYVSEWPCNPPSFKETVTQYCKEVRELGLRIQEYISESLGLEKDYIKDVLGEQGQHMAVNYYPPCPEPELTYGLPGHTDPNALTILLQDLHVSGLQVLKDGKWLAVRPQPDAFVINIGDQVQALSNGLYRSVWHRAVVNAEKPRLSVASFLCPNDEALISPAKPLTEDESGAIYRGFTYAEYYKKFWSRNLDQEHCLELFKNK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0596 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 336 - -
Apr1g0596 338 SUPERFAMILY Clavaminate synthase-like 11 327 - -
Apr1g0596 338 Gene3D - 4 328 IPR027443 -
Apr1g0596 338 PANTHER PROTEIN DOWNY MILDEW RESISTANCE 6 1 336 - -
Apr1g0596 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 38 139 IPR026992 -
Apr1g0596 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 288 IPR005123 -
Apr1g0596 338 Pfam 2OG-Fe(II) oxygenase superfamily 190 288 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0596 Apr-Chr1 7195548 7202399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0596 10 336 Glycosyltransferase AT5G59530 32.544 4.10e-52 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0596 K24028 - gmx:100782253 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0596 1 7195548 7202399 Apr1g0596 1 7195548 7202399 ECH