Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0593 ATGTCTCCAGGTCCCGTTGTTGATGCTTCCCCTGAGGTCGATGCCGAGCAACAAGTTCCCTCTGTTGATGACACTACCCACAAGAAGAAATCTCAACCCCAGGAAGACGATGCTCCCGTTGTTGAGGACGTCAAGGATGATGACAAGGACGAAGCGGATGAGGATGACGACGACGACGACGACGATGAAGATGACAAGGATGATGGCGCTCAAGGTGCTACTGAGGGTTCAAAGCAAAGCAGAAGTGAGAAGAAGAGTCGAAAAGCTATGTTGAAGCTGGGGCTAAAACCTGTTACTGGCGTCAGTAGGGTCACGATAAAAAGAACAAAAAATATTCTCTTTTTCATCTCAAAACCTGATGTCTTCAAGAGTCCAAATTCTGAGACCTATGTCATATTTGGGGAGGCAAAAATAGAGGACTTGAGCTCGCAGTTGCAGACGCAGGCTGCTCAACAGTTCAGGATGCCAGATATGGGATCTGTGATGGCAAAACAAGATCAAGATGCTGCAGCTGCAGGAGCACAGCCTGAAGAAGAGGAGGAGGTTGATGAAACTGGCGTTGAGCTCCATGACATTGATTTGGTGATGACACAGGCAGGAGTGTCAAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACAACGGGGATATTGTTGGTGCCATCATGGAGCTCACTACTTAA 681 0.4831 MSPGPVVDASPEVDAEQQVPSVDDTTHKKKSQPQEDDAPVVEDVKDDDKDEADEDDDDDDDDEDDKDDGAQGATEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVMAKQDQDAAAAGAQPEEEEEVDETGVELHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0593 226 MobiDBLite consensus disorder prediction 21 39 - -
Apr1g0593 226 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 22 225 IPR016641 GO:0005854
Apr1g0593 226 PANTHER NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 2 22 225 - -
Apr1g0593 226 MobiDBLite consensus disorder prediction 1 89 - -
Apr1g0593 226 Pfam HYPK UBA domain 187 225 IPR044034 -
Apr1g0593 226 SMART NAC_2 83 139 IPR002715 -
Apr1g0593 226 Gene3D - 187 224 - -
Apr1g0593 226 Pfam NAC domain 83 138 IPR002715 -
Apr1g0593 226 MobiDBLite consensus disorder prediction 40 69 - -
Apr1g0593 226 CDD UBA_NAC_euk 191 225 - -
Apr1g0593 226 Gene3D - 89 142 IPR038187 -
Apr1g0593 226 ProSiteProfiles NAC A/B domain profile. 80 145 IPR002715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0593 Apr-Chr1 7176539 7179155 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0593 K03626 - gmx:100807402 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0593 1 7176539 7179155 Apr1g0593 1 7176539 7179155 ECH
Apr9g0972 9 18701213 18703309 Apr1g0593 1 7176539 7179155 PCT
Apr1g0593 1 7176539 7179155 Apr9g1701 9 26220465 26221791 PCT