Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0575 ATGGATTCAGATTCATGGGCTACTTGCCCCTTTTGCGATTCATCACTGGCATCACAACTTCTTGTGCACGCCAACTCTCATTTTCGCGATCTTGACGATGGTTTTGGTTCACCCCTTCAAATTCATTCTCTTCCGAGAGAACAAGAAGACAATGGTTCTCGGCATGGTGGGACTAGTAGAGATAATGGGGAATGCAAAGTGAATGACAAAATCTCTTGCCTGATTGGTTCACAGACAAAGAGCAAGTTTTACAAAATTGAGGTGGGTTTGATGACCTTGTTGAGGAACTGTTTGGAGTCTGAAGCTGGAAATTCAAAGAGCATTTTGTCGGGTTTTGTCGATCATTTTCAGTGCCTTGAGTCTGAGGATGCTGGATGGGGGTGTGGATGGCGTAACATTCAAATGCTTAGTTCTCACTTACAAGTGCAAAGACCAGAAGCAAGAAAAGCTTTGTTTGGTGGTTCGGGGTTTGTTCCTGATATTCCGTCTCTACAGAGATGGGTTGAGATTGCTTGGGAAAAGGGTTTTGATGTGCCTGGGTCTGCTCAATTCAATCATGTTATTTATGGTTCAAAAAAATGGATAGGAACTACTGAGTGTGCTGCTCTTTTGCGTTCCTTTGCTCTTCGGGCAAGAGTAGTGGATTTTGGTCCCAAGGAATCCCAAACTATCCCTGGTTCAAGCTTTGATAACACTAGAAAGAAAGCAAGTACTCATAATATGGTTGAAGGAAAAGCTAAAAAGGATGAGGCTTATCAAGTTCTCATGGATTTTGTGTGGAATTACTTTTCAGATAAAAACTCAATCCAATTTGGTCAACAGCATGTTGTGATCAGTGAGAAAACGCCCTTGTACTTTCAACATGATGGCCATTCAAGAACAATAGTTGGAATTCAAGTCAAACATCAACAGAAAGGAATTCTGCAATATAATCTCCTAGTTTTGGACCCTGCACATAGTACAGCAACTCTTGAAAGATCACTAAGGCAGAAAGTTGGATGGGAGAAACTCATAAAAAGGGGAATGCATACACTGAAGAAGCCACAATACCAGTTGTGTTATGTTGATTATGGAATTGCTAGCGAGGAGGAGATGGAAGAACTCAAGACAATTCACAGTGTCTTTCTTGAATTTTAA 1137 0.4116 MDSDSWATCPFCDSSLASQLLVHANSHFRDLDDGFGSPLQIHSLPREQEDNGSRHGGTSRDNGECKVNDKISCLIGSQTKSKFYKIEVGLMTLLRNCLESEAGNSKSILSGFVDHFQCLESEDAGWGCGWRNIQMLSSHLQVQRPEARKALFGGSGFVPDIPSLQRWVEIAWEKGFDVPGSAQFNHVIYGSKKWIGTTECAALLRSFALRARVVDFGPKESQTIPGSSFDNTRKKASTHNMVEGKAKKDEAYQVLMDFVWNYFSDKNSIQFGQQHVVISEKTPLYFQHDGHSRTIVGIQVKHQQKGILQYNLLVLDPAHSTATLERSLRQKVGWEKLIKRGMHTLKKPQYQLCYVDYGIASEEEMEELKTIHSVFLEF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0575 378 MobiDBLite consensus disorder prediction 47 63 - -
Apr1g0575 378 MobiDBLite consensus disorder prediction 39 63 - -
Apr1g0575 378 PANTHER ZINC FINGER PROTEIN 1 378 - -
Apr1g0575 378 PANTHER PEPTIDASE C78, UBIQUITIN MODIFIER-SPECIFIC PEPTIDASE 1/ 2-RELATED 1 378 - -
Apr1g0575 378 Pfam Peptidase family C78 106 353 IPR012462 -
Apr1g0575 378 Gene3D - 93 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0575 Apr-Chr1 7031962 7034768 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0575 K24134 - gmx:100781936 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0575 1 7031962 7034768 Apr1g0575 1 7031962 7034768 ECH
Apr9g1059 9 19976704 19985249 Apr1g0575 1 7031962 7034768 PCT