Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0538 ATGTCGTTTACTCTCATTCACCCTTGTCAACCACTATCTTCATCGTGTTCTTACTTTCAACCCAACCTCTTTACTGCAATTAACTGCTCTGGTTCTAATGTTCCTAACTTTCTCCCTAAATCCTGCGAAAATGGTTACCACATTGAAAGGGGTTTGGAGTTTAGTACAGGAAACGCGTTTTTCCGGCAAGAGAGCGCCACCGGCAGAGATCTCGCCGTGCTTGCCGCTTCCTTGCACAAAAAGGGTAACGGAAGCTTGCGTGTTCTTGATGCGTTGTGTGGGTGTGGAATTCGGTCGCTCCGGTATCTGGCGGAGGCCGAGGCAGATTTTGTGGCGGCGAACGATGGGAATGAGAACTATGGAAGCACAGTTGTGGAGAATTTGTCTAGGGTTTCGAGGGAAGAAGAGGGGAAATGGGTGGTTACTCATTTAGAAGCTAATCGTGTGATGATGGATTATTATTTGAAGAAGAGTTTTTTTGATTTTATTGATGTTGATTCATTTGGGAGTGATTCTTCTTTCTTAAGGTCTGCCATTAGTACATTGAAATTAGGTGGATTGCTTTATGTTACTTCAACTGATGGATACTCATCTGGTGGCCACCGTCCTCATCATTCTTTAGCTGCATATGGAGCCTATGTGCGCCCCATGCCATATTCAAATGAGGTTGGTTTGCGAATGCTTATAGGTGGGGCTGCTAGGGAGGCTTCAGTGTTGGGGTTTCATATCACCCCTTTGTTTTCTTACTATGCTTTTCATGGACCTGTTTTTCGAGTCTTGCTCAGATTGAATCGTGGGAAGATTCATGACAGTAGGCATTATGGTTACATTGGATACTGCCACCAATGTGGGAATTCCCATGAATTTTCTTGGGATCAACTTGGCCAGATGAGTTGCTCCTGCAGTGTGCCAAAGGTTTCAAACTCCCTTGTGGTGTCAGGACCACTTTGGACAGGACCTCTGCATGATGCTCCCTATCTTATGGACATGTTAAATCTGGCCAAGCAGTGGGGCTGGATAGGCTGTGATGGTAAAGATAGTCTTGAAAAGCTTATAAAATTGATGGTGGATGAAAGTGACCCCAAGTTGCCATCTGGGTACATCAAGTTGGATGAGATGGCAAGCCGTGCAAAAATTAATTCTCCACCTCTAAAGACCTTGATGAGCGCCATGCACCAGAAGGGTTATGCTGCTAGCAGGTCTCACATATCCACAAATGCAATCAAGACAAATTGCCCCATGACAGAATGCATTAAGATTGCCAAAGAACTTCTGCAAGTTTCCATCGCTTAA 1293 0.4486 MSFTLIHPCQPLSSSCSYFQPNLFTAINCSGSNVPNFLPKSCENGYHIERGLEFSTGNAFFRQESATGRDLAVLAASLHKKGNGSLRVLDALCGCGIRSLRYLAEAEADFVAANDGNENYGSTVVENLSRVSREEEGKWVVTHLEANRVMMDYYLKKSFFDFIDVDSFGSDSSFLRSAISTLKLGGLLYVTSTDGYSSGGHRPHHSLAAYGAYVRPMPYSNEVGLRMLIGGAAREASVLGFHITPLFSYYAFHGPVFRVLLRLNRGKIHDSRHYGYIGYCHQCGNSHEFSWDQLGQMSCSCSVPKVSNSLVVSGPLWTGPLHDAPYLMDMLNLAKQWGWIGCDGKDSLEKLIKLMVDESDPKLPSGYIKLDEMASRAKINSPPLKTLMSAMHQKGYAASRSHISTNAIKTNCPMTECIKIAKELLQVSIA* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0538 430 Gene3D - 366 424 IPR042296 -
Apr1g0538 430 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 59 420 IPR002905 GO:0003723|GO:0004809|GO:0008033
Apr1g0538 430 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 39 426 IPR002905 GO:0003723|GO:0004809|GO:0008033
Apr1g0538 430 CDD AdoMet_MTases 87 191 - -
Apr1g0538 430 Gene3D Vaccinia Virus protein VP39 41 360 IPR029063 -
Apr1g0538 430 ProSiteProfiles Trm1 methyltransferase domain profile. 45 421 IPR002905 GO:0003723|GO:0004809|GO:0008033
Apr1g0538 430 PANTHER TRNA (GUANINE(26)-N(2))-DIMETHYLTRANSFERASE 39 426 - -
Apr1g0538 430 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 43 422 IPR029063 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0538 K00555 - gmx:100788340 752.666