Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0537 ATGGATGATAAACAAGACAATTCGTTACCATCCCCCTTGCCGAACCAATTTTTATTAATTGATGAGGAACTTTGGCAGATGGCTGAAGAGAGGGCCCAAGAGATACTATCTACAATTCAACCAAATGTGCTATCTGAGGTCAACAGAAAGGATGTGATTGATTATGTTCAGAGGCTGATTAGAGGTTACTATGGAGCAGAGGTCTTCCCATTTGGCTCTGTCCCGCTAAAAACCTATCTTCCTGATGGAGATGTTGACTTGACAGCTCTCAGTCATGAAAATGTAGAGGAGGATTTGGCACAAGCAGTATGCAGTATACTTGAAAGTGGAGAGGACCCTGAATACCAAGTCCAGCTTGTGAAATGCACAGTGAAAAATATAGCAGTTGACATCTCTTTCAATCAGATGGCTGGACTCTATGCTCTACGCTTTCTTGAGCAGGTTGACCAACTTGTTGGGAAAAACCATATTTTCAAGCGAAGTATCATCTTAATCAAAGCGTGGTGCTATTATGAGAGTCGTATTCTTGGTGCACACCATGGACTGTTATCAACATATGCTGTGGAAACATTAGTGTTATATATTATCAATCGATTTCATTCATCAGTGCGTGGTCCTCTGGAGGTGCTATACAGGTTTTTGGACTACTATGGCAGATTTGATTGGGAACATAACTATGTCACTATAGATGGTCCAAAACCCTTATCTTCCCTTCCAGAAATTGTTGAGACACCAGAATGTGATCGGGGTGAGTTCTTGCTCCAGAAAGAGTTCCTGAAAAGTTATAGGGATATGTGTGCTTTTTCAGCAAGGGCATCTGAGAATGCAGTCCATGAATTTCCCACTAAGTTCTTGAACATCATGGATCCTCTAAGAGATGATAACAACCTAGGCCGTAGTGTCAGCAGAGCCAATTTACATCGAATTAGATTTGCTCTTACCTTTGGTGCTCGAAGGCTTAGGGGCATCCTTAAACTTCCAGGAGAAAACATGGGGGCAGCACTTGAGAAGTTTTTCACAAACACTTTGGAGAGGAATGGAAAAGGACTAAGGCCAGATGTTGACATTCCTGTTCCTGTATTTGGTACTGGAAAATCTCAAGAGTTTGTCCTCCGGGGAGATTGTGAAAGTTACTATGGTGGCCTACAATATGTTCAGTTGTATCGTAATTATGCCACACCAGTCACTGCACATCAGAGTTCTCCATCGTCACCTTCTCAGGCTGATATCCTTGCACTATCGATGCAGCAAAACTGGAGTATGTTTTATCAAACGGGTACTGATGTCTATGTCCCAGGACAAACGCTCTATCATCCAAATGTTTCCCCAAGAAGTTACAGCCTTGAAGAAAGAGCAAAATCACGAGGAACAGGGACATATATACCGGACATGGCTCATAATTCCTACTGGGACATGCGAGTAAGAGTGTCCAGGCCAAGGAGATTTACTTATACGAATCATTATTCACTGCACAAATCACCTCCAAGAAACCCAGAAGTGGGCGTTCATTCTGAGACAGCAGATGTGAATGGTAATTCAAAGCCTTTTGAGCTCTCAAAAGAAGATTTCCCCCTTCTTCCAAGCGTTCACAAAGCCATGTCAGAAGTCCAAGAGTCTGCTGACTCTGCTCAGTTACCTGAGATTCATTCTGTGACAGACATGGATGGTAATTCTAGGTCAGACATGGATGGTATTTCAAGGGCAAACATGGATGGTATTTCATGGGCAACCATGGATGTTAATTCAAGGCCTGTCATGGATGGTATTTCAAGGGCAGTAATGGATGGTAATTCAAGATCAGACGCACATGTTAATTCAAGGTCATTTGAGCTGTCAAATGAAGATTTCCCCCTTCTTTCAAGCACCCGCAAGACCATCCTGTCAGAATCCCAGAAGTCTGTTAAGTTAACTAAGCAGGCCAAGAATTCCTCATCGTCTCAACTGAATATTGATTTTGGAGATGTCAAGAATTCGCAATCACTGACAGAACCAACTTTGTCAACCAAGGATGAGAAAGAAGATTCTGGTGTTTCATTATCTCAAGATACAGTGCTAGTAGTTCCAAAGGTGGCAATGTTGACTGAGGAAGAATTTCTCGAGGGTAATGAGAAGATGTATTGA 2121 0.4234 MDDKQDNSLPSPLPNQFLLIDEELWQMAEERAQEILSTIQPNVLSEVNRKDVIDYVQRLIRGYYGAEVFPFGSVPLKTYLPDGDVDLTALSHENVEEDLAQAVCSILESGEDPEYQVQLVKCTVKNIAVDISFNQMAGLYALRFLEQVDQLVGKNHIFKRSIILIKAWCYYESRILGAHHGLLSTYAVETLVLYIINRFHSSVRGPLEVLYRFLDYYGRFDWEHNYVTIDGPKPLSSLPEIVETPECDRGEFLLQKEFLKSYRDMCAFSARASENAVHEFPTKFLNIMDPLRDDNNLGRSVSRANLHRIRFALTFGARRLRGILKLPGENMGAALEKFFTNTLERNGKGLRPDVDIPVPVFGTGKSQEFVLRGDCESYYGGLQYVQLYRNYATPVTAHQSSPSSPSQADILALSMQQNWSMFYQTGTDVYVPGQTLYHPNVSPRSYSLEERAKSRGTGTYIPDMAHNSYWDMRVRVSRPRRFTYTNHYSLHKSPPRNPEVGVHSETADVNGNSKPFELSKEDFPLLPSVHKAMSEVQESADSAQLPEIHSVTDMDGNSRSDMDGISRANMDGISWATMDVNSRPVMDGISRAVMDGNSRSDAHVNSRSFELSNEDFPLLSSTRKTILSESQKSVKLTKQAKNSSSSQLNIDFGDVKNSQSLTEPTLSTKDEKEDSGVSLSQDTVLVVPKVAMLTEEEFLEGNEKMY* 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0537 706 MobiDBLite consensus disorder prediction 637 679 - -
Apr1g0537 706 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 1 679 - -
Apr1g0537 706 MobiDBLite consensus disorder prediction 637 665 - -
Apr1g0537 706 Pfam Nucleotidyltransferase domain 61 123 IPR002934 GO:0016779
Apr1g0537 706 Gene3D Beta Polymerase, domain 2 26 157 IPR043519 -
Apr1g0537 706 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 679 - -
Apr1g0537 706 SUPERFAMILY PAP/OAS1 substrate-binding domain 157 324 - -
Apr1g0537 706 CDD NT_PAP_TUTase 48 145 - -
Apr1g0537 706 SUPERFAMILY Nucleotidyltransferase 19 176 IPR043519 -
Apr1g0537 706 Gene3D - 202 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0537 Apr-Chr1 6559597 6567575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0537 - - gmx:100787145 902.508