Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0525 ATGGCTACGTCTTCTCCTCTTCCCTTACCAGAACTCCACTTTCTTTCTCCACAAATCACTCCCAAACGCCGTCTTTCACTCTCCAAACTTCCCTCCTCTGCTTCTTCCATCTCCCGCCACGTCACCTCCAATATCATTCTTCGCACCACGCCAATCCGCGCCACCAGAGAAGAATCCGTGTTGGCCGAGCGAGTGAACGACGTGGAATGGAGCGGAAACGGAGTTGCTGCCGTTAGCGGAAATGATCGAGGCGGCACCGACGGCAATGGCACGGTAGAAGGATACGTTAACGGCGCCGCTAACGGAAGCTTGGTGAAGTACGGTTACGAAAGCGGAAATGGAAATGGTGTAGCTGCAGAGGTGTTGGAGGTTGAAGCCTTTAAGCTGAGAGAGGATGGGAGGAAGAAAAGGTTGGAGGAGATTGGAAAAGAAGATGCGTGGTTTAAACAAACTGGGAAGGAACAGGTTGAGGTAGCAGTTGCACCTGGAGGTCGTTGGAGCAGGTTCAAGACTTACTCTACAATCCAGAGGACCTTGGAAATTTGGGGATTTGTTGTGACATTCATTTTTAAGTCCTGGCTGAACAACCAGAAGTTCTCTTACAAAGGAGGAATGACTGACGAAAAGAAAACCTTAAGGCAGAAGGCCCTTGCAAAGTGGCTGAAGGAAAGCATTCTAAGATTAGGTCCTACATTCATCAAAATTGGCCAGCAATTCTCCACCAGGGTGGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCTGAGCTTCAGGATCAAGTTCCTCCATTTCCTTCGGCAACTGCTATAGCTATTGTTGAAGAAGAGCTTGGAGCTCCTTTAGGTGATATCTTTGATCAGTTTGACTATGAACCCATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGGGCAAGATTAAAGGAACAGGAGGTTGTTGTTAAAGTACAAAGGCCCGGTCTCAAGGATCTTTTTGATATTGATCTTAAAAACTTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAATCTGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATTGATTACACCAAGGAAGCTTCTAATGCAGAATTGTTTGCTAGTAATTTTAAGAACATGGATTATGTGAAAGTTCCTACAATCTACTGGGATTATACCACGCCACAGATTCTGACAATGGAGTATGTTCCAGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGCAAAAGGCTAGGGAGATATGCTGTTGAATCATATTTGGAACAAATTCTATCACATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCTGTCGATGATGTCAATGGTGGAAGATTGATCTTTTACGATTTTGGAATGATGGGGAGTATCAGTCCAAACATCCGAGAAGGATTGCTTGAAGCATTTTATGGAGTTTATGAGAAAAATCCAGATAAGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTCCCTACTGGAGATATGACTGCTGTTAGACGAACAGCGCAATTCTTCCTTAACAGTTTTGAAGAACGCCTGGCTGCACAAAGGAGGGAAAAAGAGGAAGCAACAGCTGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATAAGGAAGAAGAAACAACGTCTGGCTGCTATCGGTGAAGATTTATTATCTATTGCAGCAGATCAGCCCTTCCGATTTCCTGCTACATTTACATTTGTTGTTAGAGCCTTCTCAGTGTTGGATGGCATTGGAAAGGGCCTTGACCCTCGTTTTGACATTACTGAGATTGCCAAACCTTATGCCTTGGAGTTGCTAAGATTTCGTGAAGCAGGAGTTGAAGTTATCCTAAAGGACTTCAGGGTGAGATGGGATAGGCAATCAAAAGCATTTTACAACTTATTCAGACAGGCTGATAGGGTTGACAAGCTTGCTGAAATCATCCAAAGATTGGAGCAAGGTGATCTAAAGCTCCGAGTTCGAACTTTGGAATCTGAGAGGGCATTCCAACGTGTTGCTGCAGTCCAGAAGACAATAGGGAATGCAGTAGCTGCGGGGAGCCTAATAAATCTAGCAACAGTTTTTTATCTCAATTCACTTCGTATGCCTGCTATTGTGGCATACATCTTCTGTGCATTTTTTGGTTTTCAAGTGCTCTTGGGCATTATAAAGGTTAAGAAGCTAGATGAACGGGAACGATTGATAACAGGAACTGCATAA 2277 0.4348 MATSSPLPLPELHFLSPQITPKRRLSLSKLPSSASSISRHVTSNIILRTTPIRATREESVLAERVNDVEWSGNGVAAVSGNDRGGTDGNGTVEGYVNGAANGSLVKYGYESGNGNGVAAEVLEVEAFKLREDGRKKRLEEIGKEDAWFKQTGKEQVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVVTFIFKSWLNNQKFSYKGGMTDEKKTLRQKALAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSATAIAIVEEELGAPLGDIFDQFDYEPIAAASLGQVHRARLKEQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEASNAELFASNFKNMDYVKVPTIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRKRLGRYAVESYLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLEAFYGVYEKNPDKVLQSMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRREKEEATAELGFKKPLSKEEKIRKKKQRLAAIGEDLLSIAADQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVILKDFRVRWDRQSKAFYNLFRQADRVDKLAEIIQRLEQGDLKLRVRTLESERAFQRVAAVQKTIGNAVAAGSLINLATVFYLNSLRMPAIVAYIFCAFFGFQVLLGIIKVKKLDERERLITGTA* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0525 758 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 3 756 - -
Apr1g0525 758 Coils Coil 528 548 - -
Apr1g0525 758 PANTHER ABC TRANSPORTER-LIKE PROTEIN 3 756 - -
Apr1g0525 758 SUPERFAMILY Protein kinase-like (PK-like) 258 503 IPR011009 -
Apr1g0525 758 CDD ABC1_ADCK3-like 257 505 - -
Apr1g0525 758 Pfam ABC1 atypical kinase-like domain 256 504 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0525 Apr-Chr1 6403015 6421213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0525 - - gmx:100791330 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0525 1 6403015 6421213 Apr1g0525 1 6403015 6421213 ECH
Apr1g0525 1 6403015 6421213 Apr9g0110 9 1339147 1345425 PCT