Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0518 ATGGCAATCAGGGACCCAACATCACCACCCACGCCACCACCTCTCCCACCTTCACACACTATCTCTCTCGTCCAACCCTCCCACAAAAACAAACACAAACACAAACCCAAAGTCGTTCGCCTCTTCCGCTCCGTTTTCCGCTCCTTACCCATCATAAACCCCGTTTGCAAGTTCCCAACGCTCCCCCCCAACGGTTACCACAAGACCCTTAACGCCGTCAACAACGGCAAAAGAGTCTCCGGCACCTTGTTCGGTTACCGCAAAGGACGCGTTAGCCTCTCCGTTCAAGAATCCCCGAGGTGCCTTCCTTCGTTGGTGGTTGAGTTATCCATGCAAACAAGCATTTTGCAGAAGGAGATAGCGGCGGGGATGGTCAGAATCGCGCTTGAATGTGAAAAAAGGGAAGAGAAGGAGAAGACGAGGGTAGTTGAGGAACCGTTATGGACGATGTATTGTAATGGGAAGAAAAGTGGGTATGGTGTGAAGAGAGAAGCGACGGAAGAGGACCTTTATGTGATGGAGCTTCTGAAGGCTGTGTCAATGGGTGCTGGCGTGATTCCGTTGAGATCAGTTGATGATGTAGATGGAGGAGATTTGGCTTATATGCGAGCTCCTTTTGAGCATGTTGTGGGGTCTAAGGATTCTGAGACTCTTTATATGTTGAGCCCCGAGGGAAATACTGGGCCTGATCTTACTATATTTTTTGTCAGGATTTAA 717 0.4951 MAIRDPTSPPTPPPLPPSHTISLVQPSHKNKHKHKPKVVRLFRSVFRSLPIINPVCKFPTLPPNGYHKTLNAVNNGKRVSGTLFGYRKGRVSLSVQESPRCLPSLVVELSMQTSILQKEIAAGMVRIALECEKREEKEKTRVVEEPLWTMYCNGKKSGYGVKREATEEDLYVMELLKAVSMGAGVIPLRSVDDVDGGDLAYMRAPFEHVVGSKDSETLYMLSPEGNTGPDLTIFFVRI* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0518 238 Pfam Protein of unknown function, DUF617 79 237 IPR006460 GO:0010274
Apr1g0518 238 PANTHER PROTEIN MIZU-KUSSEI 1 7 238 - -
Apr1g0518 238 PANTHER PROTEIN MIZU-KUSSEI 1 7 238 IPR006460 GO:0010274
Apr1g0518 238 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 79 238 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0518 Apr-Chr1 6325985 6326701 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0518 - - gmx:100792553 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0518 1 6325985 6326701 Apr1g0518 1 6325985 6326701 ECH
Apr8g1264 8 17682756 17683388 Apr1g0518 1 6325985 6326701 PCT