Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0517 ATGTCTCTCACTCTCAGCATCTCACACACTTTCCCTCAAGTAAAGTGGCCCAATTTCTTCAAGCCCACCAAACCCACTCTTACCTTCCCCATTCCCAATGCTTCCTCTTCCCATTCCTTAGCCCAACTCAGCGTCGGTGAAGATTTACCATCCAACTACGGTGATTGTCTTCCCAAGCCTCTCCTTCACCTTCGCAGAAGAGCCGGCGTTCTACTCCATCCGACGTCGTTTCGTGGCCCCTATGGCATCGGCGATCTCGGTCAAGAAGCCTTTCGCTTCATTGACTGGCTCCATAACGCAGGTTGCTCCGTTTGGCAGGTTCTTCCTCTTGTGCCACCTGGCAGAAAGGCTAACGAAGAGGGATCTCCTTACTCTGGCCAGGACGCTAATTGTGGCAACACGCTCTTGATCTCTCTTGAAGAGCTTGTTCAGGATGGCTTGTTGGAAAAACACGAACTTCCTCAACCAATTGATGCAGAGCGCGTAAATTTTTCAGTTGTTGCTGATATTAAGGATCCATTGATTACTAAAGCTGCCGAGAGGCTCATTTCGAGTGAAGGGGAACTGAAAACACAGCTTGAGAATTTTAAAAGGGATCCTAACATATCAAGCTGGCTTGAAGATGCAGCCTATTTTGCTGCAATTGATGACAGTTTAAACACATTCAGCTGGTACAATTGGCCTGAACCTTTAAGAAATCGGCATCTTGTAGCTCTAGAAGAAATTTACCAACAAAAGTGTGATTTTATAAATGTATTTATTGCCCAACAGTTCTTGTTCCAAAGGCAATGGCAGAAAATTCGCAATTATGCGCAGAGCAAGGGAATCAGCATAATGGGAGACATGCCCATATATGTTGGTTATCATAGTGCAGATGTTTGGGCAAATAAGAAACAGTTTTTACTGAACAGGAAAGGCTTTCCACTTTTAGTTAGCGGTGTTCCTCCTGATGCATTCAGTGAAACTGGTCAGCTGTGGGGAAGCCCCCTGTACGACTGGAACTCCATGGAGAAAGATGGATACTCATGGTGGATACGACGTATACAACGTGCACAGAATTTATTTGATGAATTTAGGATTGACCACTTTAGAGGATTTGCTGGATTTTGGGCTGTTCCCTCTGAAGCAAAAGTAGCTTTGTTTGGAAAGTGGAAGGTAGGACCTGGAATGTCCTTATTTGATGCCATTTTCAGAGCCGTCGGAAGGATTAATATTATAGCAGAAGACTTGGGAGTTATCACTGAGGATGTAGTGCAACTAAGAAAATCCATTGGGGCACCTGGAATGGCTGTTCTCCAGTTTGGGTTTGGAAGTGATGCTGACAACCCCCATTTGCCCCATAATCACGAATGGAATCAAGTTGTCTATACAGGGACTCATGACAATGACACAATTGAAGGTTGGTGGGAAGCTTTGAACCAAAAAGAGAAATCCAATGTATTAAGTTATCTTTCATTAAGTGAGGAAGATAGCATTTCGTGGGGGCTAATCCAGAGGGTACTGGCTTCCGTTGCTCAAACATCAATAATACCTATGCAAGATGTTCTTGGACTGGGGAGTTCTGCCCGGATGAATATTCCTGCAACTCAGTTCGGAAACTGGGGTTGGAGAATTGCAAGTTCTGTGAGCTTTGATAGCTTGGAGAGAGAGGCATTCAGACTCAAAGAAATGCTTTCAATGTATGGCCGGCTTTGA 1695 0.4466 MSLTLSISHTFPQVKWPNFFKPTKPTLTFPIPNASSSHSLAQLSVGEDLPSNYGDCLPKPLLHLRRRAGVLLHPTSFRGPYGIGDLGQEAFRFIDWLHNAGCSVWQVLPLVPPGRKANEEGSPYSGQDANCGNTLLISLEELVQDGLLEKHELPQPIDAERVNFSVVADIKDPLITKAAERLISSEGELKTQLENFKRDPNISSWLEDAAYFAAIDDSLNTFSWYNWPEPLRNRHLVALEEIYQQKCDFINVFIAQQFLFQRQWQKIRNYAQSKGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLLVSGVPPDAFSETGQLWGSPLYDWNSMEKDGYSWWIRRIQRAQNLFDEFRIDHFRGFAGFWAVPSEAKVALFGKWKVGPGMSLFDAIFRAVGRINIIAEDLGVITEDVVQLRKSIGAPGMAVLQFGFGSDADNPHLPHNHEWNQVVYTGTHDNDTIEGWWEALNQKEKSNVLSYLSLSEEDSISWGLIQRVLASVAQTSIIPMQDVLGLGSSARMNIPATQFGNWGWRIASSVSFDSLEREAFRLKEMLSMYGRL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0517 564 PANTHER 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC 27 564 IPR003385 GO:0004134|GO:0005975
Apr1g0517 564 Pfam 4-alpha-glucanotransferase 72 539 IPR003385 GO:0004134|GO:0005975
Apr1g0517 564 Gene3D Glycosidases 63 564 - -
Apr1g0517 564 TIGRFAM malQ: 4-alpha-glucanotransferase 59 549 IPR003385 GO:0004134|GO:0005975
Apr1g0517 564 SUPERFAMILY (Trans)glycosidases 49 563 IPR017853 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0517 23 564 Glycoside Hydrolase AT5G64860 72.560 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0517 K00705 - gmx:100795007 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0517 1 6319623 6324413 Apr1g0517 1 6319623 6324413 ECH