Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0510 ATGGCGAAACAGCTATGCCTATCATTTTACCAAAGTAGCAAAGCCTGTGCCAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGATCTGAAATAACTCTGATGGAGCAAAGTAAGGAGAAAAATGCTCCTTGGTTATCGGTGCCACAATTTGGGGACTGGGATATGAAGGGACAAGTGCCAGACTACTCAATGGATTTCTCAAAAATTCGGGAAATGAGGAAGCAAAACAAGACAAATATTTCAAGGGCAAGTCTTGGTAATGAAGAGGAACTGATGACTTCTACCACTACCAATATAAACACTGATCACAGTGAAACTGAACGCCAGCACCCCCACTACCACCAAACCAGTTCTCCAACTACAAGGAGGAGCTTTCTGAGCTACTTCAACTGTTGTGTAAAGGCCTGA 414 0.4372 MAKQLCLSFYQSSKACAKSLSLSLSLSLSGSEITLMEQSKEKNAPWLSVPQFGDWDMKGQVPDYSMDFSKIREMRKQNKTNISRASLGNEEELMTSTTTNINTDHSETERQHPHYHQTSSPTTRRSFLSYFNCCVKA* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0510 137 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN 36 136 - -
Apr1g0510 137 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 36 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0510 Apr-Chr1 6270549 6273170 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0510 - - aprc:113863571 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0510 1 6270549 6273170 Apr1g0510 1 6270549 6273170 ECH