Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0504 ATGGCATCAACTTCTATCACGACTTTCTCCATCTACTCGCAATCCCAAACAAAGTTTTTCAATCTGCTTGGGCATCCATTGATTCACAGCTGCAACAAACGCACATCAATTTCGTTTCAGCCAGCTATAGCTCGCACTACCCTTTTCACAGTGTTCACTTGTTCCCACACTCCTTGCACATCCACTTCAAAATTTTCACCCGGAAGAAGTTTATCCAAGTTCCTCTCAGAAAAGATAGCATTTTTTCTCATTGGGTCGTTTATCTTCATGGGTTGCTTCAGCAGAAGAGTTGCCTTTGCAGAAACAGTGCCTTCTGTGGGTTCTGGTGCAGCGTTGGAGGAGAAGATGAAGCCAACTGAAGAGAAAAGCGAGGAGGAAGAAGAAGAAATGTGTGAGAAGATTTTGGAGAAGGATCCGAGAAACGTTGAAGCTCTGAAGGTGGTTTTGTATGGGAAAATTAGGAGAGGGAAATCGAAGGAGGCTTTGAAATTTGTGGAGGATTTGATTGCTGCGGAACCAAATCAGGTTGAGTGGAGACTTTTGCTGGCACTTTGTTATGAGACAATGGGGCGCTTCAGTACTGCTAAGAGATTGTTAAAGGAAATCTTACAGAAAAAACCTCTTCTTGTCCGAGCTCTGCATAGTTTGGCTATGGTGATGCACAAGAACCATGAAGGTCCTGCTGTATTTGAAATGCTAAACAAGGCTCAAGAGCTAGCTTCCCGGGAAAACAGAGTTACCGAGGAGAGAAATATAAGAATCTTAATTGCACAAATGCATGTTGTACAGCATTTGTGTGCTTTGCAGGATAATTTGGAGGAGGGATTAAAAAGATTTCAAGATTTGATTGATGAAAATCCTCGAGATTTTAGGCCTTACCTTTGCCAGGGAATAATATACAGTCTCCTGAATAAAGGAGAGGAAGCTGCACAGCAGTTTGAAACATATCAAACTCTTGTGCCTGAAGAATTTCCTCAGAGGGGATTTCTCGATGATGTTACCTTAGCAGCGAAAAGAACATCCCGGGAACAGTTTCTGAAGGAATTTAGAAGACAATTTTCTTACCGGAAATAG 1074 0.4218 MASTSITTFSIYSQSQTKFFNLLGHPLIHSCNKRTSISFQPAIARTTLFTVFTCSHTPCTSTSKFSPGRSLSKFLSEKIAFFLIGSFIFMGCFSRRVAFAETVPSVGSGAALEEKMKPTEEKSEEEEEEMCEKILEKDPRNVEALKVVLYGKIRRGKSKEALKFVEDLIAAEPNQVEWRLLLALCYETMGRFSTAKRLLKEILQKKPLLVRALHSLAMVMHKNHEGPAVFEMLNKAQELASRENRVTEERNIRILIAQMHVVQHLCALQDNLEEGLKRFQDLIDENPRDFRPYLCQGIIYSLLNKGEEAAQQFETYQTLVPEEFPQRGFLDDVTLAAKRTSREQFLKEFRRQFSYRK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0504 357 Pfam Tetratricopeptide repeat 154 213 - -
Apr1g0504 357 Gene3D Tetratricopeptide repeat domain 112 336 IPR011990 GO:0005515
Apr1g0504 357 SUPERFAMILY TPR-like 129 322 IPR011990 GO:0005515
Apr1g0504 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 5 349 - -
Apr1g0504 357 PANTHER OS05G0182100 PROTEIN 5 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0504 Apr-Chr1 6225539 6229592 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0504 - - aprc:113852504 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0504 1 6225539 6229592 Apr1g0504 1 6225539 6229592 ECH