Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0501 ATGTCTTCTGCAAGCAAGGGTGATAGGAAGGCTTCCCTTGATGCAGCATCATGGTTGTTCAATGTAGTCACGTCTGTGGGAATAATCCTTGTGAATAAGGCCCTCATGGCTACATATGGTTTTAGTTTTGCTACAACTTTAACTGGTCTGCATTTTGCTACAACAACCTTGTTGACAATCATTCTTAAATCACTGGGATATATCCAGACCTCTCATCTTCCATTATCTGATATAATCAAATTTGTCTTATTTGCAAATTTTTCCATTGTTGGAATGAATGTGAGTTTAATGTGGAACTCTGTCGGTTTCTATCAGATTGCTAAGCTGAGCATGATTCCAGTATCTTGTTTCCTGGAGGTTGTCTTGGACAATGTACGATATTCAAGGGACACAAAGCTTAGTATTGTTTTGGTTTTGCTTGGTGTTGCTGTCTGTACAGTCACCGATGTTAGTGTTAATGCAAAGGGTTTCATAGCTGCTGTAATAGCAGTATGGAGCACAGCACTGCAACAGTATTATGTGCATTTTCTTCAAAGGAAGTATTCTATTGGGTCGTTTAACTTGTTGGGCCACACTGCACCAGCACAGGCAGCAAGTTTACTGCTAGTAGGCCCCTTTCTGGACTATTGGTTGACAAACAAACGAGTTGATGCCTACGACTATGGTTTTACATCCACTATGTTCGATGATGGAGAAATTTGTTGGTTGCTGAGGACAATGGGGAGGAATCCGTTATAG 738 0.4079 MSSASKGDRKASLDAASWLFNVVTSVGIILVNKALMATYGFSFATTLTGLHFATTTLLTIILKSLGYIQTSHLPLSDIIKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCFLEVVLDNVRYSRDTKLSIVLVLLGVAVCTVTDVSVNAKGFIAAVIAVWSTALQQYYVHFLQRKYSIGSFNLLGHTAPAQAASLLLVGPFLDYWLTNKRVDAYDYGFTSTMFDDGEICWLLRTMGRNPL* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0501 245 PANTHER SOLUTE CARRIER FAMILY 35 7 228 - -
Apr1g0501 245 Pfam Triose-phosphate Transporter family 24 193 IPR004853 -
Apr1g0501 245 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 7 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0501 Apr-Chr1 6152019 6160103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0501 24 208 Organic Solute Cotransporters AT3G10290 24.352 3.58e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0501 - - gmx:100800306 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0501 1 6152019 6160103 Apr1g0501 1 6152019 6160103 ECH
Apr8g1160 8 16629837 16633424 Apr1g0501 1 6152019 6160103 PCT