Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0493 ATGGATAGGTATCAGAGGGTAGAGAAGCCCAAGGCTGAGAGTCCTATAAACGAGAACGAGATACGCATTACTACTCAAGGAAGGATGAGGAATTATATCACCTACGCCACCACTCTCCTTCAGGAGAAAGGATCTGATGAAATTGTTCTCAAAGCAATGGGACGTGCAATAAATAAGACTGTAATGATTGCTGAGCTGATCAAGAGAAGAATTGTTGGTCTGCATCAAAACACACTAATTGGATCAACTGATATAACTGACACATGGGAACCACTAGAAGAGGGCCTTCTTCCTTTGGAGACTACTCGCCATGTTTCAATGATCACCATCACCTTGTCAAAGAAAGAACTGGATACTTCCTCCACAGGATACCAACCTCCGCTACCAGCTGATCAAGTAAAGCCTTTGAATGAATATGAAGAGGAAGGAGGCTCACCAAGGATGCGAGGAAGAGGACGTGGTCGTGGAAGGGGCAGGGGTAGAGGAATTTACAATGGGGGTATGGATTATGGTGATGGCTGGGATGGTGGACGTGGCTATGGTGGCAGAGGGCGTGGCCGTGCAAGGGGGCGTGGTTTACGGGGACGAGGACGAGGCTATGGTCCCCAGCCGGTTGGGTACTATGACTATGGTGAATATGATGTACCACCTGCCCCACGTGGCCGTGGACGTGGAAGGGGAAGAGGCCGTGGACGTGGTCGTGGCCGGGGAGCGGTGGCTTGA 723 0.5048 MDRYQRVEKPKAESPINENEIRITTQGRMRNYITYATTLLQEKGSDEIVLKAMGRAINKTVMIAELIKRRIVGLHQNTLIGSTDITDTWEPLEEGLLPLETTRHVSMITITLSKKELDTSSTGYQPPLPADQVKPLNEYEEEGGSPRMRGRGRGRGRGRGRGIYNGGMDYGDGWDGGRGYGGRGRGRARGRGLRGRGRGYGPQPVGYYDYGEYDVPPAPRGRGRGRGRGRGRGRGRGAVA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0493 240 Pfam Alba 19 83 IPR002775 GO:0003676
Apr1g0493 240 MobiDBLite consensus disorder prediction 135 149 - -
Apr1g0493 240 MobiDBLite consensus disorder prediction 118 240 - -
Apr1g0493 240 PANTHER RIBONUCLEASE P PROTEIN SUBUNIT P25-LIKE PROTEIN 1 236 - -
Apr1g0493 240 Gene3D - 14 118 IPR036882 GO:0003676
Apr1g0493 240 SUPERFAMILY AlbA-like 16 129 IPR036882 GO:0003676
Apr1g0493 240 PANTHER RIBONUCLEASE P SUBUNIT P25 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0493 Apr-Chr1 6037794 6042302 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0493 - - cam:101498857 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0493 1 6037794 6042302 Apr1g0493 1 6037794 6042302 ECH