Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0491 ATGGCGCCGTTACCCCTTTTTCATCTTACCCTTTTGCCACTAATAATCTATAAGATCGCTCTTTCCTCGGCTGCGGTGGATCCCACACAAGGGTTCACCCCTCTTCCGTTAGATAATTCAAATTTTGTTGTCCAAAAGCCTTACGATGTTCCCGTTAACAAGCGCTACAGCTTTATAAATGGCGTGCACAAACTCTGGGTTTACTCCACAGACAAGCCTCACACACCTACCAGCAACACAGAGCCACGAACTGAGATTCGAATCAGTGGATACGATTATACATCTGGTGTATGGCAATTTGAAGGGTATGGTTACGTGCCTAGTGGGACGACGGGGGTATGCATTATGCAAGTGTTCGGTGGAAGCTCCTCTGCCACATCCTTGCAGCTGAGGATCTATGATGGTTCGCTCACTTCTTATAGGTCCCCTGTTCTGGCTCGGAACATCTACGATAGGTGGTTCAGGGTGAACGTGATCCATGATGTCGGTGCCTCCAATGTCAAGGTTTATATTGATGGAGAGCTCAAGTACGATGGAGCTGACCATGGACCCGACACTCACTACTTCAAGTTTGGGGTTTACACACAGAATGATCCTTCTAACTACATGGAATCTCGTTGGAAAGACATCAAAATTTTTAAAAAATAG 648 0.4614 MAPLPLFHLTLLPLIIYKIALSSAAVDPTQGFTPLPLDNSNFVVQKPYDVPVNKRYSFINGVHKLWVYSTDKPHTPTSNTEPRTEIRISGYDYTSGVWQFEGYGYVPSGTTGVCIMQVFGGSSSATSLQLRIYDGSLTSYRSPVLARNIYDRWFRVNVIHDVGASNVKVYIDGELKYDGADHGPDTHYFKFGVYTQNDPSNYMESRWKDIKIFKK* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0491 215 Gene3D - 35 215 - -
Apr1g0491 215 Pfam Alginate lyase 38 213 IPR014895 -
Apr1g0491 215 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 204 IPR013320 -
Apr1g0491 215 PANTHER BINDING PROTEIN, PUTATIVE, EXPRESSED-RELATED 17 215 - -
Apr1g0491 215 PANTHER ALGINATE LYASE 17 215 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0491 - - pvy:116143988 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0491 1 6006603 6007598 Apr1g0491 1 6006603 6007598 ECH