Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0485 ATGCAAATAGCACGATGGCGGAACTTCTTGTCTTTGAAGACTCACGCGATTCCCTCCGCTACGCATCTCTCTGCATTTCATTCCACTCCCTGTTCGTGTCAGAAATGGAATAACAAATTCAACTCCGATATAAGAAGAGGTCAACAACCATCTAAGAATCAATTCAAATACATTACACGTCAAAAGCGTGCTGATGCAAAGAAAGCTCTGAATAGTCTTCTTTACAATAGTGGATCCTATAACTTTTCATCTGAGGAAAAATGGTATGGAGACCATGGTAGGTGTTCCCATAAAGGTCAACCAAAGTCTGGTCAGCGGTCTGGTGGAAAACCACAAAAGAAAACTAAACGAAAAATCAGAAGAGAAAGTTTCTCTGAGGACTTTGATGTTCCTACTGAGCAAGTATTCCAGGCAACATTTGGTAACAGAAGGTATACCTGGTCCTTCAATAATTGGAGGGGTTCTTCTGAACGTTCCACATCTGGGTTTGAATGGAGGGAACATTCAAGTTGGGCAAACAAATGGAAGAATGAAAGTGATGCTGAGTATGATGATGATTCATGTTGTATAGGATCAAGTTCTGATAGAACTATTCTTGGTCTGCCACCAACAGGTCCATTAAGGATTGAAGATGTTAAAAATGCATTCCGGTTATCGGCTTTAAAATGGCATCCTGATAAGCATCACGGCCCTTCCCAGGCAATGGCTGAAGAAAAATTCAAACTCTGTGTAAATGCATACAAGACATTATGCAATGCTCTCTCCCCATCTTAG 774 0.4096 MQIARWRNFLSLKTHAIPSATHLSAFHSTPCSCQKWNNKFNSDIRRGQQPSKNQFKYITRQKRADAKKALNSLLYNSGSYNFSSEEKWYGDHGRCSHKGQPKSGQRSGGKPQKKTKRKIRRESFSEDFDVPTEQVFQATFGNRRYTWSFNNWRGSSERSTSGFEWREHSSWANKWKNESDAEYDDDSCCIGSSSDRTILGLPPTGPLRIEDVKNAFRLSALKWHPDKHHGPSQAMAEEKFKLCVNAYKTLCNALSPS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0485 257 ProSiteProfiles dnaJ domain profile. 194 255 IPR001623 -
Apr1g0485 257 Pfam DnaJ domain 198 252 IPR001623 -
Apr1g0485 257 SUPERFAMILY Chaperone J-domain 152 252 IPR036869 -
Apr1g0485 257 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 256 - -
Apr1g0485 257 SMART dnaj_3 193 255 IPR001623 -
Apr1g0485 257 MobiDBLite consensus disorder prediction 91 124 - -
Apr1g0485 257 CDD DnaJ 198 252 IPR001623 -
Apr1g0485 257 Gene3D DnaJ domain 171 255 IPR036869 -
Apr1g0485 257 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0485 Apr-Chr1 5923445 5945589 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0485 - - gmx:100526896 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0485 1 5923445 5945589 Apr1g0485 1 5923445 5945589 ECH