Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0477 ATGGGAGCGTCCACTTCGGCGGAGCCGAGGGTTTCGGCGGAACAGAAAGAGGCGGAAGCCGTCGCAGCCTCAACCGGAGCTCTTCCAATACTTCAGAAAGCATTCTCCAAGTTTGCCAATCCCGAAACTAACGCCGTTACCTTAGAAAATCTGGAGCGATGCTTTGGTTTCGTTCGCGAAGGTCGAAGTTATTCCGGAGGCAACGTGTCGGATTTGTTGCCGGTGTTATTAAATCACTTAGGTTCGTCGTTAGTAGATCAATTTTTCGTGACTGATAGAGGGGGAATAAATTGGGTTGAATTTGTGAGAGGTTATAACAAGTGCTGTGGTAGGGTGTCTGCGTCGATTTCGCTGAACATGCTCCTTAGAGTGTTCGTTGATATATCAGGAAGAGCGAGTGTGCCTCTGCATTTGGAGTTTGAATCAGGGGATGCTGATTGTAAGATTAATGGGTTTCTTCTTCCCAGTCACGTGTTGTTACTTCTTTCGGTGTGTTGGGTTATGTCATGGGGTTCTAGGATTTTGAAAGGGGAAGGGAGTACGAGTTTGCCAGATTTGACTCATTTGGTATTGTCAGCTAGTACATCGTGTGCCAAAGTTGAGGGTGGTTTTAATGTGTGGGATTGTGACATCTCGAGCTTGGAGGTTCAACTTCCCGCAGGGAAGTTTGTTACGTGGGTTATGAGTACTGTGCCTTGTCTTCCGGATTGCTTAAGACAGTATTTTCATGCAAGACTGCAAATGGCAGTAACTGCAGGGGATGAAGTGGCATCTTCCTCCTCTGTTGGAGATATTTCATCAACAGATGCATCTAATTATATTTTGACCCAAGGAAGGGCGTGGGCAATTTCCATCACGCAGAAAAGTACAGTGAATGATGAGATTTCTCGAGCATTTATTAGCAATGGAAGTCGATTGGATGATAACCTTATTTATCGGTCATCCACTCATGGAAGAGGGCTCAACAGATTTTGGTCTCGTGTTGATGGGTACAAGGGTCCTTTGCTAATTTTGGTTACTGCATGTTCAGGAGATGCTCATGAGCGAAATTCCATCAATAGGAAATGGGTTGTGGGTGCCTTAACAGATCAAGGTTTTGAAAACAAAGATATCTTCTATGGAAACTCTGGATGTTTATATTCTATTAGCCCAGTGTTTCATGTATTCCCCCCTACTGGTAAAGAAAAGAATTTTGTCTATAGCCACTTGCATCCTACTGGTAAAGTATACCAATCACATCCAAAGCCAGTTGGAGTTGCATTTGGAGGAACTCCAGGGAATGAGAGAATATTTATAGATGAAGATTTTGCAAAAGTAACAGTTCGCCATCATGCAATTGACAAAACATACCAGAGTGGTTCCCTCCTTCCAGATCAGGGTTTCCTACCTATTGAAGGACTGATTTCAGAAGTTGAAGTTTGGGGACTTGGTGGGGAAGTGGCAAAGGAAGTGCAGGACTCATATAAGAAGAGAGAAGAACTTTTCACTGAACAAAGAAGAAAAGTTGACTTGAAGACATTTGCAAGTTGGGATGATTCACCTGAGAAAATGATGATGGATATGATGTCTGATCCAAATACTGTTCGAAGGGAAGACCGCTGA 1602 0.4363 MGASTSAEPRVSAEQKEAEAVAASTGALPILQKAFSKFANPETNAVTLENLERCFGFVREGRSYSGGNVSDLLPVLLNHLGSSLVDQFFVTDRGGINWVEFVRGYNKCCGRVSASISLNMLLRVFVDISGRASVPLHLEFESGDADCKINGFLLPSHVLLLLSVCWVMSWGSRILKGEGSTSLPDLTHLVLSASTSCAKVEGGFNVWDCDISSLEVQLPAGKFVTWVMSTVPCLPDCLRQYFHARLQMAVTAGDEVASSSSVGDISSTDASNYILTQGRAWAISITQKSTVNDEISRAFISNGSRLDDNLIYRSSTHGRGLNRFWSRVDGYKGPLLILVTACSGDAHERNSINRKWVVGALTDQGFENKDIFYGNSGCLYSISPVFHVFPPTGKEKNFVYSHLHPTGKVYQSHPKPVGVAFGGTPGNERIFIDEDFAKVTVRHHAIDKTYQSGSLLPDQGFLPIEGLISEVEVWGLGGEVAKEVQDSYKKREELFTEQRRKVDLKTFASWDDSPEKMMMDMMSDPNTVRREDR* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0477 533 ProSiteProfiles TLDc domain profile. 281 477 IPR006571 -
Apr1g0477 533 PANTHER TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN 1 520 - -
Apr1g0477 533 SMART 109ultra 288 477 IPR006571 -
Apr1g0477 533 Pfam TLD 310 477 IPR006571 -
Apr1g0477 533 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 520 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0477 - - gmx:100786867 909.442