Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0476 ATGCCGCCGGCGAAGAGGGGGAAAGCGAAGGCGGAGCCTAGGGCAACAACCCCATCGGAAAAACCTAATGACTTTCCGTCGTGTATTCGGTGCGTGCCTCCATCTTGCGTCGCTATAACCATCCACGCTAAGCCTGGTTCCAAATCCGCATCCGTTACAGATATCAGCGATGAAGCGGTTGGAGTGCAAATTGATGCGCCGGCCAGGGATGGCGAAGCAAACGCCGCTCTTCTTGATTACATTTGTTCTGTTTTAGGTGTGAAACGAAGACAAGTGTCTATAGGTACTGGTTCTAAGTCGAGAGATAAGACGGTGATTGTGGAAGATGTAACTCAGCAATATGTTTTTGACGCTTTGGATAGAGTCTCAAAGCAGCAGTGA 381 0.4961 MPPAKRGKAKAEPRATTPSEKPNDFPSCIRCVPPSCVAITIHAKPGSKSASVTDISDEAVGVQIDAPARDGEANAALLDYICSVLGVKRRQVSIGTGSKSRDKTVIVEDVTQQYVFDALDRVSKQQ* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0476 126 MobiDBLite consensus disorder prediction 1 24 - -
Apr1g0476 126 PANTHER OS04G0686300 PROTEIN 1 125 - -
Apr1g0476 126 Hamap UPF0235 protein YggU [yggU]. 33 121 IPR003746 -
Apr1g0476 126 Gene3D - 29 124 IPR036591 -
Apr1g0476 126 SMART DUF167_2 33 109 IPR003746 -
Apr1g0476 126 Pfam Uncharacterised ACR, YggU family COG1872 36 108 IPR003746 -
Apr1g0476 126 SUPERFAMILY YggU-like 28 114 IPR036591 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0476 K09131 - gmx:100527290 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0476 1 5869554 5870396 Apr1g0476 1 5869554 5870396 ECH