Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0473 ATGATTCCACAAGATTCTGACGTTTACGATTCACCAACACAGCGCATCATTCACGTCCAAAAGATAAATATTTGTCAAATATGTGGTGATAAAGGAGATTTAAAGCGCCTCATATACTGTGTCCAGTGTAAAGCTTGTGCTGAGCATAGTTATTGTCTAGAGAAGTTCCACAGAGAAGATGATGGAACGGTTAGCTGGAAATGTGAGGACTGTGCTCCAAACGATCCCAAATATGGATCTGAACAATTAAGAAAAAGCACACGCATAAGTTATGCAGCTGAAGCTAAATATAACAGGATGAAAATGCAAAAGGAGATTATTGCGGTTAGAAAACCAAAATCTGTCGGATCATCTGATGGTTTTCATGCTGAATGCCTTAGAAAAAATAACATTGACAAGAGACAGCTGATCCTTGAAGAGAAGAACAGTCATTTTGAGGAACCTGAATCACGTAAAGGTCCTTTGAATAATCAAGAATTGGAACATGAGAAATATGTTGATTCTGAAGCCTTAACGTCTCAGCGCATGTACTATCCGGAGTTTGACAAGCATAGCCTTGCTCACCCACTTAATGATCCAGTTTGGACGGGGCAATTTATGTTGAACAACGCAACAAATATTGGATGTGTTGCTTATGCATCAAGCGAAGCTTCCCCAAAAGTGCATTCAACAGTAACAACGCTTCCTAGACTGCTTGATGTGGAGATGTTATTGAGATACGCTATTTGGCCCGAGAGTTTTGACATGTTTCCTCCTAATGGTGATAGTATTGGTCTCTATTTTTTCCCCCAGTATGAAGGGGATGAGACGGTCTTTGATGCTGTGTTGAATGATGTAATTGAAAAAGAACTTGCTCTCAAGGCAGTCATTGACACCGTGGAGCTCCTCATTTTTTCTTCATATTTATTACCCCCAAATGATAGGCGAATTTGTGACAAGTATTATTTGTGGGGTGTTTTCAAACCAAAGCCAAGAAGTGGGAATATTCAGTCCAAGTAA 999 0.3974 MIPQDSDVYDSPTQRIIHVQKINICQICGDKGDLKRLIYCVQCKACAEHSYCLEKFHREDDGTVSWKCEDCAPNDPKYGSEQLRKSTRISYAAEAKYNRMKMQKEIIAVRKPKSVGSSDGFHAECLRKNNIDKRQLILEEKNSHFEEPESRKGPLNNQELEHEKYVDSEALTSQRMYYPEFDKHSLAHPLNDPVWTGQFMLNNATNIGCVAYASSEASPKVHSTVTTLPRLLDVEMLLRYAIWPESFDMFPPNGDSIGLYFFPQYEGDETVFDAVLNDVIEKELALKAVIDTVELLIFSSYLLPPNDRRICDKYYLWGVFKPKPRSGNIQSK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0473 332 SUPERFAMILY FYVE/PHD zinc finger 22 77 IPR011011 -
Apr1g0473 332 PANTHER - 12 331 - -
Apr1g0473 332 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 12 331 - -
Apr1g0473 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 12 97 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0473 Apr-Chr1 5816555 5821329 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0473 - - gmx:102668229 487.263