Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0469 ATGACCAAGTTTAGGAAACTAGGTCGACCCACCGGTCACCGCATGTCCATGCTTAGAACCATGGTTTCCCAGTTGGTGAAGCACGAGCGCATCGAAACTACCGTTGCCAAGGCGAAAGAGATCCGAAGGCTTGCGGATAATATGGGATCCGTATGTGCTGCAAGACGTGCTGCTAGTTTTGTGCGAGGAGATGATGTCCTTCACAAGCTGTTTACAGAACTGGCTTATCGGTACAAGGATAGAGCTGGTGGATACACCAGATTGCTTCGAACCCGTATTCGAGTGGGCGATGCTGCACCAATGGCATATATCGAGTTCATTGACAGAGAAAATGAGCTTAGGCAGTCAAAGCCACCTACTCCTCAACCACCTCCGAGAGCACCCCTTGATCCCTGGACACGTTCTCGTCTCAGCAGGCAATTTGCACCTCCTAAAGAGGATAAATCTGAATCTGATTTGTGA 462 0.4957 MTKFRKLGRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEIRRLADNMGSVCAARRAASFVRGDDVLHKLFTELAYRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDRENELRQSKPPTPQPPPRAPLDPWTRSRLSRQFAPPKEDKSESDL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0469 153 MobiDBLite consensus disorder prediction 110 153 - -
Apr1g0469 153 Pfam Ribosomal protein L17 17 107 IPR000456 GO:0003735|GO:0005840|GO:0006412
Apr1g0469 153 TIGRFAM L17: ribosomal protein bL17 4 108 IPR000456 GO:0003735|GO:0005840|GO:0006412
Apr1g0469 153 PANTHER RIBOSOMAL PROTEIN L17 1 151 IPR000456 GO:0003735|GO:0005840|GO:0006412
Apr1g0469 153 Gene3D Ribosomal protein L17 1 107 IPR036373 GO:0003735|GO:0005840|GO:0006412
Apr1g0469 153 SUPERFAMILY Prokaryotic ribosomal protein L17 3 110 IPR036373 GO:0003735|GO:0005840|GO:0006412
Apr1g0469 153 PANTHER BNAA09G06940D PROTEIN 1 151 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0469 K02879 - gmx:100785280 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0469 1 5782262 5784568 Apr1g0469 1 5782262 5784568 ECH