Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0454 ATGGTGAGGCTTTTAGGATTGACTCGTGGGGAGGTTGATGAACCCAGGGAAATTGCGTCGAGGTCCAATCTGAATAGTGAGTCCAGTGAAAATGGGTGGCTCATTAGGTTCTTTGACTCGTCGTTCTTCTGTGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGATCACTCCGGGGTGCGTGATTATCTCTGTAATAGAATGTATACACTTCCCTTGCAGGGAATTGAGAGTTATTTGTTCCAAGTGTGTTACATGATGATACATAAGCCGAGCCCGTCATTGGACAAGTTCGTCATAGATGTGTGCTGCAAGTCACTTAAGATTGCTTTGAAGGTGCATTGGTTCTTATTGGCGGAGCTCGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGCCAGATTGCAGCCACCTTGATGGGTGAGTGGCCTACCCTAATACGGCCTCAAAATGCACCTTCAAGCCCTGGGGGCAAGAACCAAGTTTTGAATAAGATATTGTCATCAAAACAGCGTTTGTTGTCGCTCACGTCTTCACCACCTGCTCAGAGGTCGTTGTCATTCTCACCTTCTTCGGGAAACAATTTGCAGGAGGATGGTAGTCCACATTCTCCTGAGGAAACCAAGTTGTTTAAGAAATTTATGCCAGGTCCAAAGGTTAGAGATGCTTTGCTTTTTAGGAAATCGGTGGAGAAAGATGATGAATACTCTGAAAAGGATGGCTTTTTCAAGAGGCTTTTAAGAGATAGCAAAGGTGATGATGAGTTGGGCCAGAAAATTCGTGATACTTTTCTCTTCCGTAAGTCATCTGAGAAATATGATGAAGATTCTGAAAAGGATAATTTCTTTAAGAGACTCTTAAGGGACAGCAGAGGGGATGATGAAGAATCTGAAAAGGATGGTTTCTTTAGAAGGCTCTTAAGAGACAGTAAAGGTGAGGATGATGATTTAGCCTCAAGTTCAGATGGATTCTTTAAGAGGTTGTTTCGTGATAGCAAGAATGGTTCTGAGGATAAAACACTCACTAAGACAACGGAGGATGAAGAAAAAGAAGGATTTTTCCGAAAGCTTTTCAGAGAGAAATTTGAAGATAAGAAGGATGGGAATGATGAAGGAGATATTGTTAATTCTGAAGAGAAATGTGCAAAGCTTGCTGAAGATGATGAAAAAGAAGGGTTTTTCCGGAAATTCTTTAAGGATAAATTTGAGGACAAAAAAGATACAAATGATATAATTGAAGATGGTACTACCAATGTTGAGGAAGAAGAGGCTTCTGATTTTTCTTTGTTCAAAAGAATTTTTCGCGTGCACCCAGAAGATGGTAAAAGTAGTTCAGCCAATGAAAACAATAATGGTGGCTTGCTTGAAAGTAGTCCAGGTACAGAGAATTTTTTCCGCAAATTGTTTAGAGATCGTGACCGTTCAATTGAAGACTCAGAGTTACTTGGTTCAAAAAAACAGAAAGAGAAGCATCCTGGATCGCCAAAGCAACGAAATGAGAAAACAAAGCCCCCATTACCAATTAATTCATCGCAGTTCCGGAAACGAGCTTACCATGAGTCATTGGATTTTGTGCTGTCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCAGTTGAAGATCGCAAACATGCCCTGCATGAGTCGCTTGTGGAGATCAATTTACATTTACAAGAGGTTCAGAATACTGGAGGAGTTTGTTTTCCGTTGGGAAAGGGCATGTACCGTGTGCTTCTTATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTACCTGATTTGTGTTGAAGTTTTGAGATGTGAAATGCCAAGCAATTCAAAGGAGACATCCAGTTCTCAAAAACTTTCTAAAGGTGGAATTCCTTTGGCAAATGGAGACGCTCTCTTGCAAAAGCCGCCCCCTTGGGCTTATCCCTTATGGACAGCACAAGAGGTGTATCGCAATAGCAACGATAGAATGTCCAAATCAACTGCTGAGGCTATTGACCTAGCAATGACCCATGTACCTGAGACAAAAGTCAAATTTGTTAGTCTAAATCTTTCGGTGGAAATGCAATTACATGGTCAGCAGGAGAAGACTGAAGCAGATCTATCTAAGGGCCATCGGCATCCTGCTTCAATTAACAGGAGTATACAAGAAGTTGCAAGGCCATATCATGACAGTGATATGGAGTGGGTACGGGTAGTGTTGAAAGCTGATCCTCGGATTAGACTGGAAGATATTGAGGATCAAGCACCACGACGACGGAAGGAACATCGTCGTGTTCCTAGTACAGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAGGGGGAAGCACCTCTTGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCGAAGCCAAGGGCTAACGGAATTACTCCCAAAGCTAGTGATGCCTTGTCTGGTGAACTTTGGGTGGTAAAGAAAGAGAGGATACGCAAGGCTTCTGTCCATGGGAATTTTCCTGGTTGGGACTTGCGATCTGTTATTGTAAAGAGTGGGGATGATTGTAGGCAGGAGCATCTGGCAGTTCAACTTATTTCACACTTCTATGATATTTTCCAAGAAGCCGGCCTACCTCTCTGGCTGCGCCCTTATGAAGTTCTATGTACTTCTTCTTACACTGCTCTTATTGAAACAATTCCAGATACGGCTTCTCTACATTCTATCAAGAGTAGATATCCCAACATCTCAAGTTTACGTGAATTTTTTATTGCCAAGTATCAAAAAGATTCTCCAAGTTTTAAACTTGCTCAGAGGAACTTTGTTGAAAGTATGGCTGGATATTCCCTGGTTTGCTACCTTTTGCAGGTGAAGGATAGGCATAATGGAAACCTCTTACTGGATGAAGAAGGTCATATTATTCATATTGATTTTGGCTTTATGCTTTCCAATTCACCTGGTGGTGTTAATTTTGAAAGTGCGCCCTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCTGATGCTGAGGGCATGCCTAGCGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGGTTTCTTACTTGCCGTAAGCATGCTGAGCGTGTTATTCTTCTTGTTGAGATGTTGCAGGAGTCTGGTTTCCCCTGCTTTAAAGGTGGTCCCCGGACAATACAGAACCTCCGAAAACGATTTCATCTCAATTTGACAGAAGAGCAATGTGTATCTTTGGTGCTTTCACTGATTAGCAGCAGCCTGGATGCATGGCGGACACGGCAGTATGATTATTACCAGAGGGTTTTGAATGGGATATTATGA 3315 0.422 MVRLLGLTRGEVDEPREIASRSNLNSESSENGWLIRFFDSSFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLQGIESYLFQVCYMMIHKPSPSLDKFVIDVCCKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPTLIRPQNAPSSPGGKNQVLNKILSSKQRLLSLTSSPPAQRSLSFSPSSGNNLQEDGSPHSPEETKLFKKFMPGPKVRDALLFRKSVEKDDEYSEKDGFFKRLLRDSKGDDELGQKIRDTFLFRKSSEKYDEDSEKDNFFKRLLRDSRGDDEESEKDGFFRRLLRDSKGEDDDLASSSDGFFKRLFRDSKNGSEDKTLTKTTEDEEKEGFFRKLFREKFEDKKDGNDEGDIVNSEEKCAKLAEDDEKEGFFRKFFKDKFEDKKDTNDIIEDGTTNVEEEEASDFSLFKRIFRVHPEDGKSSSANENNNGGLLESSPGTENFFRKLFRDRDRSIEDSELLGSKKQKEKHPGSPKQRNEKTKPPLPINSSQFRKRAYHESLDFVLSLCETSFGLVDVFPVEDRKHALHESLVEINLHLQEVQNTGGVCFPLGKGMYRVLLIPEDEAVLLNSREKAPYLICVEVLRCEMPSNSKETSSSQKLSKGGIPLANGDALLQKPPPWAYPLWTAQEVYRNSNDRMSKSTAEAIDLAMTHVPETKVKFVSLNLSVEMQLHGQQEKTEADLSKGHRHPASINRSIQEVARPYHDSDMEWVRVVLKADPRIRLEDIEDQAPRRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAKPRANGITPKASDALSGELWVVKKERIRKASVHGNFPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFIAKYQKDSPSFKLAQRNFVESMAGYSLVCYLLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGMPSEFFDYFKVLCIQGFLTCRKHAERVILLVEMLQESGFPCFKGGPRTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL* 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0454 1104 MobiDBLite consensus disorder prediction 483 502 - -
Apr1g0454 1104 MobiDBLite consensus disorder prediction 183 205 - -
Apr1g0454 1104 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 821 1089 IPR000403 -
Apr1g0454 1104 SUPERFAMILY ARM repeat 54 126 IPR016024 -
Apr1g0454 1104 Pfam Phosphatidylinositol 3- and 4-kinase 843 1050 IPR000403 -
Apr1g0454 1104 PANTHER BNAA02G34040D PROTEIN 4 258 - -
Apr1g0454 1104 PANTHER BNAA02G34040D PROTEIN 262 331 - -
Apr1g0454 1104 PANTHER BNAA02G34040D PROTEIN 324 1104 - -
Apr1g0454 1104 SUPERFAMILY Protein kinase-like (PK-like) 562 1097 IPR011009 -
Apr1g0454 1104 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Apr1g0454 1104 MobiDBLite consensus disorder prediction 447 462 - -
Apr1g0454 1104 SMART pi3k_hr1_6 843 1102 IPR000403 -
Apr1g0454 1104 Gene3D - 901 1102 IPR036940 GO:0016301
Apr1g0454 1104 MobiDBLite consensus disorder prediction 483 513 - -
Apr1g0454 1104 Gene3D - 45 146 IPR042236 -
Apr1g0454 1104 MobiDBLite consensus disorder prediction 443 463 - -
Apr1g0454 1104 CDD PI4Kc_III_beta 812 1104 - -
Apr1g0454 1104 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 940 960 IPR018936 GO:0016301
Apr1g0454 1104 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 846 860 IPR018936 GO:0016301
Apr1g0454 1104 MobiDBLite consensus disorder prediction 786 810 - -
Apr1g0454 1104 Gene3D - 687 896 - -
Apr1g0454 1104 MobiDBLite consensus disorder prediction 183 213 - -
Apr1g0454 1104 PANTHER PHOSPHATIDYLINOSITOL KINASE 324 1104 IPR015433 GO:0046854|GO:0048015
Apr1g0454 1104 PANTHER PHOSPHATIDYLINOSITOL KINASE 4 258 IPR015433 GO:0046854|GO:0048015
Apr1g0454 1104 PANTHER PHOSPHATIDYLINOSITOL KINASE 262 331 IPR015433 GO:0046854|GO:0048015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0454 Apr-Chr1 5569696 5587062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0454 1 1103 Lipid Metabolism Gene Families AT5G09350 69.515 0.0 1532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0454 K19801 - gmx:100781715 1927.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0454 1 5569696 5587062 Apr1g0454 1 5569696 5587062 ECH
Apr2g1023 2 16565995 16578530 Apr1g0454 1 5569696 5587062 PCT