Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0451 ATGTCGAGTGTGGAGGCGGGAGCGCAAACGCTGATTCGGCGGCCGTCGAGAAGCGCTGCCACGACGACATTCTCGACGGAGGTGTTCGATAACGACGTCGTTCCGTCCTCACTCGCCTCCATCTCTCCCATTCTCCGAGTGGCGAATGAGATCGAAAGCGAAAGACCTAGGGTTGCGTATCTATGTCGGTTTTACGCGTTCGAGAAGGCGCACCGATTGGATCAGAGCTCTAGCGGGCGTGGTGTGAGGCAGTTCAAGACGCTGTTGCTGCAACGACTCGAGAGGGACAACAGGCAGAGTCTTCCGGCTCGGGTTAAGAAGACGGATGCAAGGGAAATCCAGGCTTATTATCAGCAATACTATGAGCATTATGTGAGAGCTCTTGACCAAGGAGAGCAAGCAGACAGAGCACAGCTCGGTAAAGCTTACCAGACCGCTGGGGTGCTTTTCGAAGTGCTTTGCGCCGTTAACAAAACTGAGAAGGTCGAAGAAGTAGCTCCTGAGATCATAGCCTCTGCTAGAGATGTCCAAGAAAAGACGGAGATTTATGCGCCCTTTAACATTCTTCCGTTGGATTCTGCCGGGGCTTCTCAGCCTATTATGCAGCTTGAAGAGATTAAGGCAGCTGTATCTGCGCTGTGGAACACTCGTGGCCTGAACTGGCCAAGTTCATTTGAGCAACAAAGGCAAAGAACTGGAGATTTGGATATGCTTGATTGGCTTAGAGCCATGTTTGGGTTCCAGAGGGACAGCGTCAGGAACCAGAGAGAGCATTTGATTCTGCTTCTTGCTAACTATCACATAAGGCTACACCCCAAACCTGAGCCTCTTAACAAGCTTGATGATCGTGCCGTGAATGGAGTGATGAATGATCTCTTCAAGAACTACAAAAAATGGTGCAAATTTTTAGGACGAAAACATAGTTTACGACTCCCTCAAGGTCAGCAAGAGATACAGCAGAGGAAGATACTTTATATGGGCTTGTATCTTCTCATATGGGGTGAAGCATCCAATGTTCGCTTCATGCCAGAGTGTCTATGCTACATATTTCACAATATGGCATATGAACTTCATGGTTTGTTGGCTGGAAATGTCAGCATTGTAACTGGTGAAAACATCAAACCTTCTTATGGTGGTGATGATGAGGCATTTTTGCGCAAGGTTATAACACCCATTTACCGAGTAATTCAAAGGGAAGCCGAAAAGAGCAGAAATGGAACGGCTCCTCACTCAGCCTGGTGCAACTACGACGATCTAAATGAGTATTTCTGGTCACCTGATTGCTTTTCCCTTGGATGGCCCATGCGTGATGATGGTGAATTTTTTAGATCAACATTGAATTTGACACTGGGAAGAAAGAGTGCTCAGCATAGATCTGGAAGACCTGGCAAATCAAATTTTGTTGAGACTCGGTCATTCTGGAACATCTTCCGGAGTTTTGATCGTCTTTGGACCTTTTATCTACTGGGTTTGCAGGTGATGTTCATTATTGCCTGGGACGAGATTTCAGTGATGGATATCTTTCAGAAAAATGAGTTATATAAGCTCTCTAGCATATTCATTACAGCAGCCATTCTACGCTTGCTTCAGAGTATCTTGGATCTAGCTCTGAACTTTCCGGGTTATCATCGGTGGAGATTCATTGATGTGCTACGAAATATTCTCAAAGTCATTGTTAGTCTTTTTTGGGTTGTTGTTCTTCCCCTCTTCTATGTGCATTCCTTCAGCGGTGCCCCTGAGTTCATGAAGACGTTGCTTTCCTTCGTTCGTCAATTGAAGGGGACTCCACCGTTGTATATCTTCGCAGTTGGAGTATATCTGCTTCCAAATTTACTAGCAGCTATTCTCTTTTGTTTTCCAATGCTCAGGCGTTGGATTGAAAACTCGGACTGGCACATTGTTAGACTCCTCTTATGGTGGTCACAGCCGAGAATCTATCTTGGAAGAGGAATGCATGAAAGTCAATTTGCTCTCCTAAAGTACACTCTTTTCTGGGTGATTCTTTTGGCTGCAAAATTTTCATTCAGCTATTTTGTCCAGATCAAACCTCTTGTTCAGCCAACTAAGGACATAATGAGCATTCGACATGTTAATTTTGCTTGGCATGAGTTTTTCCCCAATGCTAAAAATAACTATGGAGCAGTTATTGCACTCTGGTCCCCTGTACTTATGGTCTATTTCATGGACACTCAAATTTGGTACTCCATCTTCTCAACTCTGTGCGGTGGTGTTATTGGAGCCTTTGATCGTCTAGGGGAGATACGCACTCTAACCATGCTAAGATCGCGGTTCCAGTCATTGCCTGGTGCATTCAACACATACTTGGTTCCTACTGAGAAGAAGCAGAGAAGAACTTTCTCTTTCTCGACACGATTTGCAGAGATTTCCACAAGCAGAAGGAGTGAAGCTGCTAAATTTGCTCAGTTATGGAATGAAGTTATTTGCAGTTTCCGTGAGGAAGATATCATAAGTGATTGGAAAGTGGATCTTTTGATGGTTCCTTATTCATCAGATCCTAGCTTGAAAATAATTCAGTGGCCACCATTTCTACTTGCAAGCAAGATTCCGATTGCACTGGATATGGCAGCTCAATTTCGAGGAAGGGGCTCTGATCTTTGGAAGCGCATATGTGCTGATGAATATATGAAGTGTGCTGTGATTGAATGCTATGAATCTTTTAAAAATGTCCTGTATGCTTTGGTAGTTGGAGAAGCTGAAAAAAGGACCATCTCTATCATCATTAAGGAAGTTGAAAACAGCATCTTTAAGAATACGCTTCTTACAAATTTCCGAATGGGGTTTTTGCCTTCCCTTTGTAAGAAGTTTGTGGAGCTTGTGGAAATCTTGAAAGATGCTGATTCATCCAAGCGAGGTACAGTGGTGGTCTTGTTGCAAGACATGTTAGAAGTGTTTACTCGTGATATGATGGTAAACGAGATCAGCGAATTGGCAGAACTTAATCATAGTAGTAAGGATACTGGAATGCAACTTTTTGCTGGTACTGATGCAAAACCGGCAGTGCTATTCCCTCCGGTGGTCACTGCACAATGGGAGGAACAGATTAGACGTCTTTATTTGCTCTTGACGGTGAAAGAATCAGCCATTGAGGTTCCAACAAACCTTGAAGCACGCAGAAGGATTGCATTCTTTACCAATTCGTTGTTCATGGATATGCCTCGTGCTCCACGAGTTCGTAAAATGCTCTCATTCAGTGTCCTAACTCCATACTACAGTGAAGAGACTGTCTATTCGAAGAATGACCTAGAGGTTGAAAATGAAGATGGTGTGTCAATCATATATTACCTGCAAAAGATCTACCCTGATGAGTGGAATAACTTCATGGAACGACTAAATTGTAAGAAAGACAGTGAAATATGGGAGAAAGATGAGCATATATTGCAGTTACGTCACTGGGCCTCGTTACGAGGACAAACTCTTTGCAGGACAGTTAGGGGAATGATGTACTACCGGCGGGCTATCAAGCTTCAGGCTTTTCTTGATATGGCAAACGAGAAGGAGATACTTGATGGCTATAAAGCTGTTACCGTTCCATCTGAGGAAGACAGAAAGAGTCACAGATCCCTATATGCCAATTTAGAGGCTATTGCTGACATGAAATTCACATACGTCGCTACCTGTCAGAACTATGGGAATCAGAAGCGTAGCGGAGACCGCCGTGCAACAGACATTCTGAATTTGATGGTTAACAACCCATCGCTTCGTGTGGCATATATTGATGAAGTCGAAGAAAGAGAAGGAGGAAAAGTACAGAAAGTTTATTATTCTGTGCTGGTCAAAGCCGTGGACAGTCTTGACCAAGAAATTTTTCGAATTAAACTACCGGGTGCAGCAAAGTTAGGAGAAGGGAAGCCAGAAAATCAAAATCATGCCATCATTTTTACAAGAGGCGAAGCTCTTCAGACCATTGACATGAACCAGGATAATTACTTGGAAGAAGCTTTAAAAATGCGCAACCTTCTGGAAGAATTTAGTGAAGATCATGGCGTGCGCCGACCTACTATATTAGGCGTTCGTGAACATATCTTTACTGGCAGTGTCTCTTCCTTGGCTTGGTTTATGTCAAATCAAGAAACAAGCTTTGTCACAATTGGCCAAAGAGTTCTTGCAAGACCCCTGAAGGTGCGATTCCACTATGGTCATCCAGATGTTTTTGATAGAATTTTCCACATTACTCGTGGAGGATGTAGCAAGGCTTCTCGTGGTATCAATTTGAGTGAGGATATTTTTGCCGGATTCAACTCAACATTGAGACGAGGAAACGTTACTCATCATGAATATATCCAGTGCGGAAAGGGTAGAGATGTTGGGCTAAATCAAATCTCACTTTTTGAAGCAAAAGTAGCTTGTGGAAACGGAGAGCAGACACTAAGCAGAGATATCTATCGGCTGGGGCATCGTTTTGACTTTTTCCGCATGCTATCATTTTATTTTACGACCATTGGATTTTATATAAGCTCTATGATTGTGGTCCTCACATGTTATGCATTCCTATATGGCAAACTGTACCTGTCTTTGAGTGGACTTGAGGATACTATAGTAAAGTTGGCGAGGAGAAAGGGTGATGATGCACTAAAGGCAGCAATAGCTTCGCAATCCCTTGTTCAAATAGGACTCCTAATGACATTGCCCATGATCATGGAAATCGGATTAGAGAGAGGGTTCAGAACTGCTATAGGTGACTTCATAATTATGCAGTTGCAGCTGGCACCTGTTTTCTTCACTTTCTCGCTAGGGACAAAGATGCACTATTTTGGGCGCACTCTTCTGCATGGAGGGGCAAAATACAGAGCAACCGGACGTGGTTTTGTTGTTCGCCATGAGAAGTTTGCCGAAAATTACAGGCTGTACTCTAGGAGTCACTTTGTAAAAGGGATTGAGCTCACAATGCTTCTCTTATGTTATAGGATTTATGGATCAGCTACACCTGATTCATCATCATATGGCCTTCTCTCATGGTCAATGTGGTTTTTAGTTTGTTCTTTTCTGTTTTCTCCTTTCCTTTTCAATCCATCAGGATTTGAATGGCAGAAGATAGTTGAGGACTGGGATGATTGGAAAAAATGGATAAGTAGTCGAGGTGGTATTGGTGTTCCTTCAAACAAGAGTTGGGAATCATGGTGGAATGAAGAACAGGAGCATCTGCAGTACACTGGGATTTTGGGGCGTATTTGTGAGGTTGTTATTTCCCTGCGTTTCTTTGTCTATCAATATGGAATTGTGTATCATCTCCATGTAGCCAGAGGTGACAAGAGCATCGTGGTTTATGGTCTGTCCTGGCTTGTGATAGTAGCTGCCATGTTTATCCTGAAGATTGTGTCCATGGGTAGAAAGAAGTTCAGCGCAGATTTCCAGTTGATGTTTCGTCTTCTCAAATTGTTTCTGTTCATAGGAGCCATTGTCGCTCTTGGCTTAATGTTTACTCTGCTTAGTCTCACTGTTGGAGACATCTTTGCAAGCCTCCTAGCCTTTTTGCCAACAGGATGGGCACTTATAGAGATTGCACAAGCGTGCAGACCATTGGTTAAGGGCATTGGAATGTGGGGATCTGTGCAAGCTTTGGCAAGGGGTTACGAATACCTGATGGGAGTGGTTATTTTTGCGCCAGTGGCTATATTGGCTTGGTTCCCATTTGTTTCAGAATTCCAAACTAGACTGCTATTCAACCAAGCATTCAGCCGAGGGCTTCAAATCCAGCGCATTCTGGCTGGCGGCAAGAAGCATAAGTAG 5748 0.4362 MSSVEAGAQTLIRRPSRSAATTTFSTEVFDNDVVPSSLASISPILRVANEIESERPRVAYLCRFYAFEKAHRLDQSSSGRGVRQFKTLLLQRLERDNRQSLPARVKKTDAREIQAYYQQYYEHYVRALDQGEQADRAQLGKAYQTAGVLFEVLCAVNKTEKVEEVAPEIIASARDVQEKTEIYAPFNILPLDSAGASQPIMQLEEIKAAVSALWNTRGLNWPSSFEQQRQRTGDLDMLDWLRAMFGFQRDSVRNQREHLILLLANYHIRLHPKPEPLNKLDDRAVNGVMNDLFKNYKKWCKFLGRKHSLRLPQGQQEIQQRKILYMGLYLLIWGEASNVRFMPECLCYIFHNMAYELHGLLAGNVSIVTGENIKPSYGGDDEAFLRKVITPIYRVIQREAEKSRNGTAPHSAWCNYDDLNEYFWSPDCFSLGWPMRDDGEFFRSTLNLTLGRKSAQHRSGRPGKSNFVETRSFWNIFRSFDRLWTFYLLGLQVMFIIAWDEISVMDIFQKNELYKLSSIFITAAILRLLQSILDLALNFPGYHRWRFIDVLRNILKVIVSLFWVVVLPLFYVHSFSGAPEFMKTLLSFVRQLKGTPPLYIFAVGVYLLPNLLAAILFCFPMLRRWIENSDWHIVRLLLWWSQPRIYLGRGMHESQFALLKYTLFWVILLAAKFSFSYFVQIKPLVQPTKDIMSIRHVNFAWHEFFPNAKNNYGAVIALWSPVLMVYFMDTQIWYSIFSTLCGGVIGAFDRLGEIRTLTMLRSRFQSLPGAFNTYLVPTEKKQRRTFSFSTRFAEISTSRRSEAAKFAQLWNEVICSFREEDIISDWKVDLLMVPYSSDPSLKIIQWPPFLLASKIPIALDMAAQFRGRGSDLWKRICADEYMKCAVIECYESFKNVLYALVVGEAEKRTISIIIKEVENSIFKNTLLTNFRMGFLPSLCKKFVELVEILKDADSSKRGTVVVLLQDMLEVFTRDMMVNEISELAELNHSSKDTGMQLFAGTDAKPAVLFPPVVTAQWEEQIRRLYLLLTVKESAIEVPTNLEARRRIAFFTNSLFMDMPRAPRVRKMLSFSVLTPYYSEETVYSKNDLEVENEDGVSIIYYLQKIYPDEWNNFMERLNCKKDSEIWEKDEHILQLRHWASLRGQTLCRTVRGMMYYRRAIKLQAFLDMANEKEILDGYKAVTVPSEEDRKSHRSLYANLEAIADMKFTYVATCQNYGNQKRSGDRRATDILNLMVNNPSLRVAYIDEVEEREGGKVQKVYYSVLVKAVDSLDQEIFRIKLPGAAKLGEGKPENQNHAIIFTRGEALQTIDMNQDNYLEEALKMRNLLEEFSEDHGVRRPTILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLARPLKVRFHYGHPDVFDRIFHITRGGCSKASRGINLSEDIFAGFNSTLRRGNVTHHEYIQCGKGRDVGLNQISLFEAKVACGNGEQTLSRDIYRLGHRFDFFRMLSFYFTTIGFYISSMIVVLTCYAFLYGKLYLSLSGLEDTIVKLARRKGDDALKAAIASQSLVQIGLLMTLPMIMEIGLERGFRTAIGDFIIMQLQLAPVFFTFSLGTKMHYFGRTLLHGGAKYRATGRGFVVRHEKFAENYRLYSRSHFVKGIELTMLLLCYRIYGSATPDSSSYGLLSWSMWFLVCSFLFSPFLFNPSGFEWQKIVEDWDDWKKWISSRGGIGVPSNKSWESWWNEEQEHLQYTGILGRICEVVISLRFFVYQYGIVYHLHVARGDKSIVVYGLSWLVIVAAMFILKIVSMGRKKFSADFQLMFRLLKLFLFIGAIVALGLMFTLLSLTVGDIFASLLAFLPTGWALIEIAQACRPLVKGIGMWGSVQALARGYEYLMGVVIFAPVAILAWFPFVSEFQTRLLFNQAFSRGLQIQRILAGGKKHK* 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0451 1915 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 5 1914 - -
Apr1g0451 1915 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 322 433 IPR026899 -
Apr1g0451 1915 Pfam Vta1 like 40 165 IPR039431 -
Apr1g0451 1915 SMART FKS1_dom1_2 320 436 IPR026899 -
Apr1g0451 1915 Pfam 1,3-beta-glucan synthase component 1037 1732 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Apr1g0451 1915 PANTHER GLUCAN SYNTHASE-LIKE PROTEIN 5 1914 - -
Apr1g0451 1915 Gene3D - 26 188 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0451 Apr-Chr1 5539912 5553018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0451 13 1915 Glycosyltransferase AT1G05570 61.062 0.0 2408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0451 K11000 - gmx:100777985 3352.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0451 1 5539912 5553018 Apr1g0451 1 5539912 5553018 ECH
Apr2g1026 2 16600465 16615760 Apr1g0451 1 5539912 5553018 PCT