Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0449 ATGCCCATCGAAATGCCGAAGGGATTACCTTTCTCGGTGGACACGTGGAGCCCATCATCGAAGAGCAGTAAGAGACACCATTTCCTCACTCACGCCCACAAAGACCATTCCTCTTCCATCACTTCCCATGCTTCCTTCCCTATTTACTCCACCCTTCTCACCAAAACCCTCATTCTTCAACATTACCCTCACCTTCTCTCTTCCTTCTTTCTCCCTATTGAGGTTGGCCAATCCCTTACCATCCATGATCCCGCCGGTGCCTTCACTGTCACCGCTTTCGACGCCAATCACTGCCCTGGGGCTGTGATGTTCTTGTTTGAAGGGATATTTGGTAACATTCTGCACACCGGAGATTGCAGACTCACCCCAGAGTGTCTGCTGAATTTACCTGATAAATATGTTGGGAGGAAAGGAAGAGAGCCTCGCTTCCCTCTTGATTGTGTTTTCTTAGACTGTACTTTTGCCAATTTCTCTCAGGGGATGCCTACCAAGCATTCCGCTATTCAACATGTTATTAATTGTATATGGAAGCATCCTGATGCACCGACGGTGTATCTAACCTGCGACATGCTTGGTCAAGAAGAGATCCTTGTTAATGTGTCCCAGACATTTGGAGATAAAATATACGTTGATAGAGCGAAAAATCCGGATTGTCTCAAGAATCTATGTCTTAATGTGCCTGAAATCCTTTGTGAAGATCCATCTTCTCGTTTCCATTTGTTTGATGGATCTCCAAGACTATATGAAAGAGCAAAAGCAAAGATGGTCGAGGCCAAGGCAACTCTCCAACCTTTGCCTCTCATTATCCGGCCTTCTGCCCAGTGGTATGTTTGTGAAGAAGAGTTCTCAGAAATTGAAAACACTAGAAAAAAGAGGATGAATGAAGCAGTTAAGGATCAGTTTGGCGTATGGCATGTCTGTTACTCAATGCACTCATCCAAGGAAGAATTAGAATGGGCACTTCAACTTCTTGCACCTAGGTGGGTTGTTTCAACAACTCCCAGCTGCAGGGCTATGGAGCTGGATTATGTTAAGAAACATTGTTTTAACTCTAAAGGAGCTCTCAACAACTCTGTGCGCAAGCTTCTGGATATGATTGTGGAAACTTCTGATGGTGCTGATACATTGGTCAATTCTGCAAGATGTTATCCTGTACTTGAAGGGACCCCTCAGCCTTTTACGCAAACTAAATCACCAATCAAACAGTGCGTTGACGCTAAAGTACCGGAAGAATTGTCTCTTCATGGCAAAAGCTTGCCTATCACAACTTTTGGAAGAGCGAGGCTCAGTCTCCAAGATGTTGGCGTTTCACGAGGAGGATCTGATATGTTGCCTGTTAATGTTCTTTCTCAAAAAGTTTCAAGTGATACCCGACAAGAATTCTTGAACGATATGGATGATGTTGAAGTGAAGGAGGGATCACCGGAAAGAAATAATGATTTACATCCAGTGGAGAAGCATCACCAATCCGAGGTTCAGGAAGGAACGAGAGTTAATATGAGTACCTCTTATCTAAATATTGGATCTTCGGGCTTGAGTGGAAGTGTCATAAAGTTGTACAGGTCAAGGAATGTTTCTGTGCCTCAACCTCTTCCCTCCTTAGCAGGTCTTATGAAGTCCATTAAACGTGTCAAGAGGGGAATTGATTATTAA 1653 0.4398 MPIEMPKGLPFSVDTWSPSSKSSKRHHFLTHAHKDHSSSITSHASFPIYSTLLTKTLILQHYPHLLSSFFLPIEVGQSLTIHDPAGAFTVTAFDANHCPGAVMFLFEGIFGNILHTGDCRLTPECLLNLPDKYVGRKGREPRFPLDCVFLDCTFANFSQGMPTKHSAIQHVINCIWKHPDAPTVYLTCDMLGQEEILVNVSQTFGDKIYVDRAKNPDCLKNLCLNVPEILCEDPSSRFHLFDGSPRLYERAKAKMVEAKATLQPLPLIIRPSAQWYVCEEEFSEIENTRKKRMNEAVKDQFGVWHVCYSMHSSKEELEWALQLLAPRWVVSTTPSCRAMELDYVKKHCFNSKGALNNSVRKLLDMIVETSDGADTLVNSARCYPVLEGTPQPFTQTKSPIKQCVDAKVPEELSLHGKSLPITTFGRARLSLQDVGVSRGGSDMLPVNVLSQKVSSDTRQEFLNDMDDVEVKEGSPERNNDLHPVEKHHQSEVQEGTRVNMSTSYLNIGSSGLSGSVIKLYRSRNVSVPQPLPSLAGLMKSIKRVKRGIDY* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0449 550 Gene3D - 9 332 IPR036866 -
Apr1g0449 550 MobiDBLite consensus disorder prediction 470 492 - -
Apr1g0449 550 Pfam DNA repair metallo-beta-lactamase 229 336 IPR011084 -
Apr1g0449 550 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 1 447 - -
Apr1g0449 550 PANTHER DNA REPAIR METALLO-BETA-LACTAMASE FAMILY PROTEIN 461 547 - -
Apr1g0449 550 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 461 547 - -
Apr1g0449 550 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 1 447 - -
Apr1g0449 550 SUPERFAMILY Metallo-hydrolase/oxidoreductase 25 339 IPR036866 -
Apr1g0449 550 Gene3D - 160 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0449 Apr-Chr1 5501438 5504039 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0449 K15340 - gmx:100807948 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0449 1 5501438 5504039 Apr1g0449 1 5501438 5504039 ECH