Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0448 ATGGCGTTCACTGTGAGAATTTGCTACACTTCCTTCCCTTGCGTTCCTCGCATCCCACAAACTTCGAGAAGAAAAAATGTCCATTTTTCAATGATTCGTGCGGTTCAAAGTGGTGAAGCAGACACCCCAGAGAGTAAGAGTGAAGGGTCATCTAAGGCTCAGTCTTCAAGCGCTGCTCCTAAGACTCCCAAGAAACCTGTGTATTCCATGAAGAAAGGTCAGATTGTGAGGGTGGACAAGGAGAAATATCTCAATAGCATCAATTATCTTTCTGTTGGGCACCCACCTTATTACAAAGGATTAGACTACATTTATGAAGACCGTGGGGAGGTCCTGGATATGCGTATATTTGAAACAGGAGAGCATGCGCTTGTTGCATGGGTAGGGATCCCCACCGCCCCAGCTTGGCTTCCTACTTACATGCTTATCAAGTCAGAGAAGCTCAATTATGAGAGGCTATGA 462 0.4567 MAFTVRICYTSFPCVPRIPQTSRRKNVHFSMIRAVQSGEADTPESKSEGSSKAQSSSAAPKTPKKPVYSMKKGQIVRVDKEKYLNSINYLSVGHPPYYKGLDYIYEDRGEVLDMRIFETGEHALVAWVGIPTAPAWLPTYMLIKSEKLNYERL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0448 153 MobiDBLite consensus disorder prediction 36 68 - -
Apr1g0448 153 MobiDBLite consensus disorder prediction 40 62 - -
Apr1g0448 153 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT O, CHLOROPLASTIC 1 153 - -
Apr1g0448 153 Pfam Cyanobacterial and plant NDH-1 subunit O 70 144 IPR020905 GO:0005886|GO:0016655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0448 - - gmx:100500669 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0448 1 5500028 5501389 Apr1g0448 1 5500028 5501389 ECH