Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0431 ATGTCTCCCCTAATGGAAATAAGTGCTTCCAGTCTTGTACTGTCCTCTGCATCACAGCCAGAAGAGGCCAAAGAAGAGAATGGTGAGTTAGCTTTTGACTCAAATTTGCTGCAAAAAGAAGGGGACATGCCCAGAGAGTTCATTTGGCCATCTGTGGACTTAGTTAACACCACCCAAGAGGAGCTGAAAGAACCCCTTGTGGACTTAGCAATCATGAAGAATGGTGATGAAAAAGCTATTGCTAATGCTGCTAAGTTTGTGAGAAAAGCATGCTTGAAACATGGCTTCTTTCAAGTGATCAACCATGGTGTGGATCCAGATCTCATAAGTGCTGCTTATCATGAAATTGATTCCATTTTCAAGCTCCCTATGAGCAAGAAGCTTGGTGCAAAGAGAAAACCTGGTGGGGTCTCAGGCTATTCTGGTGCTCATGCAGATCGTTATTCCTCCAAGTTGCCATGGAAAGAGACATTCTCTTTCCACTACAGCCACCAAAGCATCTGCAATTCCCAGATTGTTGACTACTTCAAGTTTGTCTTAGGAGAAGACCTTCAACACACTGGGTGGGTGTATCAAAAGTACTGTGAAGCAATGAAGGGGTTATCTTTAGTAATTATGGAGCTATTGGGCATTAGTTTGGGTGTGGATCGTTTACATTATCGAAGATTTTTTCAAGACGGTGATTCAATAATGAGATGCAACTATTATCCACCATGCAATAGTTCCAATCTCACCTTAGGAACTGGCCCTCACACTGATCCAACCTCGTTAACTATTCTTCATCAAGACCAAGTTGGAGGTCTAGAAGTTTTTACAGATAACAAATGGCTAGCTGTTCGCCCTCGATCTGAAGCTTTAGTCATAAATATAGGTGACACTTTCATGGCGTTGTCAAATGGGAGATACAAAAGTTGTCTACATAGGGCATTGGTGAACAGAAAGAAGGAGAGAAGGTCACTGGTTTTCTTTGTGTGTCCAAGAGAAGACAAGATAGTGAGGCCCCCAGAGAATTTGTTATGCAGAAATGAGCCAAGAAAGTACCCTGATTTCACGTGGTCCAATTTGTTTGAATTCACTCAGAAGCACTATAGGGCTGATGTTGCTACACTCCAAAGCTTCATTGAGTGGCAATGCTCTTCCAACTCATCCAATTAA 1155 0.4234 MSPLMEISASSLVLSSASQPEEAKEENGELAFDSNLLQKEGDMPREFIWPSVDLVNTTQEELKEPLVDLAIMKNGDEKAIANAAKFVRKACLKHGFFQVINHGVDPDLISAAYHEIDSIFKLPMSKKLGAKRKPGGVSGYSGAHADRYSSKLPWKETFSFHYSHQSICNSQIVDYFKFVLGEDLQHTGWVYQKYCEAMKGLSLVIMELLGISLGVDRLHYRRFFQDGDSIMRCNYYPPCNSSNLTLGTGPHTDPTSLTILHQDQVGGLEVFTDNKWLAVRPRSEALVINIGDTFMALSNGRYKSCLHRALVNRKKERRSLVFFVCPREDKIVRPPENLLCRNEPRKYPDFTWSNLFEFTQKHYRADVATLQSFIEWQCSSNSSN* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0431 384 PRINTS Isopenicillin N synthase signature 87 104 - -
Apr1g0431 384 PRINTS Isopenicillin N synthase signature 251 272 - -
Apr1g0431 384 PRINTS Isopenicillin N synthase signature 286 312 - -
Apr1g0431 384 SUPERFAMILY Clavaminate synthase-like 36 365 - -
Apr1g0431 384 PANTHER GIBBERELLIN 20 OXIDASE 1-B-LIKE 24 380 - -
Apr1g0431 384 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 24 380 - -
Apr1g0431 384 Gene3D - 35 358 IPR027443 -
Apr1g0431 384 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 164 IPR026992 -
Apr1g0431 384 Pfam 2OG-Fe(II) oxygenase superfamily 228 326 IPR044861 -
Apr1g0431 384 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 226 326 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0431 Apr-Chr1 5330886 5335698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0431 39 364 Glycosyltransferase AT5G59530 28.612 9.46e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0431 K05282 - gmx:100816834 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0431 1 5330886 5335698 Apr1g0431 1 5330886 5335698 ECH