Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0413 ATGAACGATTTCGACGGCCTCTTAACTACCGATTTCGGGTTCAAACCCCAAGGCAAAGCAGCCCCAATGGCTGCATCCAAACCCCAATCGTCTTCTCTCAACTTCGATTTAGGTTCCCGATCCACTCGCTCCTTCAACGATTCTGTTAACGCCGCTTCCTTCGACGATCTGTTCGGTGCGCACGCCAAATCGGACTCATCCTTCAATTTGGACTCTATGTTTCGTGCCTCCTCGGATTTCGCTTCCAAGTCTGTTAACTTGCCGGTGAACGATAAACCGGTCTTCGACAAACCGGTCTACGACGACGACGATATCTTTGACGGCGTTCCCGGTCTCAAGAGCTCCTCCTCAAAGGTCTCTTACGACAGCGTTTTCGCTGCGGGAGGGAGCAACGCCGCGTTCGACGATCTTCTCGGCGGGTTCGGTAAGTCGAAGAAATCGGAGGAGGAGAAAGGTGTCGCTGATTTTGACGATTTGATCCCTGGATTCGGGAGCAGTAAGCCTTCAGCTGACAGGACGACTCCTGATATTGATTTGTCATCAGAACCTACTGTTAGTGCATCTAAATCAGCTTCCAGTGCTACAGAAGACCCTTTCAAAGTATTTGAATCAACCTCAGCCCCAGTGGATTCTTCCTCAGGCTACTTGACAGACCCATTGGAAGAAATTAGTAAATTCACTAGCTCTAGAAGCCCAAAAAATGAAAGTTCATCAAATTCTAATGGTGGAGTTTATGATGATATTGATCCCTTTGGTGGACTTGGAAATTCTGTACCTGCATTCTCAGCAGAGAGAAATAGCAGCAAGCGTAGTAACTCCCCAACGCCAAGGTCAAACGCAAGTTCAAGCTGGAGCAGAGATAAAGAATCAAATGACAAAGCGTCTGTGAGGAGTCCTGAGAGACGGACACAAAGCAAGATTCCTGTTGACCGTGATCAGGGATTTCATCAGGCTGCATTTGACATGCCTACATATTCATCTGACTCTTACAAACCAGTTGGCCAAAGGTCTACTTCCCCCTTATATGACAATGATGGTTTTAAACAGGCCAATTCACAGGCAGATATGTCTCCAAAATATGAAGAAAAATTTGAATCAAATGATGATATATGGTTGACAGTATCAGAGATTCCTCTTTTCACACAACCAACTGCTGCTCCACCACCTTCGAGACCTCCTCCTCCTCGACCAGTACATATCCCCAAGTCAGGAACAGTTTTGCCAGCTTCTGCCAATGCCAGAATGAAGGCTAATGAATATTCTTTTTCAAGTTCCACTCAATTTTCTCAGGGTCCTAATTCTGCCCCTGCTGCGGCAAAGTTTTCTTCATCTCAGTTTGATGAACTTGAAGATTTTGCCATGGGCAGGAGTCGTGGTAATGATGATGAACGTGGAAATGTTCTTTCTGATGAAGAATTAGAGATGAACTCAGCTGCTGCAGCTATGAAAGAGGCTATGGATAGAGCTGAAGCTAAATTTAGGCATGCTAAGGAAGTTAGGGAGAGAGAGAATACAAAAACTGGTAAGAGCAAAGATCCCATGCAATTTGAAAAAGATGAGAGAACTGTATCAGAGGATAGAGGAAAACAGGAAAGGTTGGACCATGAACGGCAGCAAAAGGAGAGAGAGGAAAAGGAGCAAAGAAGACGTGAGAAGGAAAAGGAGGAGAAAGAAAGAGAGCAACAGAGACTTGAGAGGGAAAGAGAAAGGGCAAGACAGGCTGTAGAAAGAGCTACTAGAGAAGCACGGGAAAGAGCAGCTGCTGAAGCTCGCCAAAGAGCTGAGAGGGCTGCTGTTGAGAAAGCTAATGCAGAAGCTAGAGAGCGTGCAGAAAGGGCCGCAGTTCAGAGGGCACAGGCTGAAGCCCGTGAAAGGGCTGCTGCTGAAGCAAAGGAAAGGGCCGAAAAGGCCGCTGCAGAGGCAAAAGAGAGGGAAGCACGGGGAAGAGCTGCAGCTGCAAGAGCTGAAGCTGAAGCTGAAGCGAGAGTCAAAGCAGAACGTGCTGCTGTAGAAAGGGCTGCTGCGGAGGCTCGAGAAAGAGCTGCAGCAGAGGCCCGAGAAAGAGCTGCAGCTGCTGCAAGGATGAACCAACAACAGAATGAGAATGATCTCGAATCGTTCTTCAGCATGGGTGCACGAGCAAGCAGTGCTCCAAGGCCTCCTCGACCTAGCTCTTCGGACTCTGTATTTGATGCCCAATTTCAGTCAGATGTGACCCGGAAATCTACAAGTGTATCTTCAAGCATGAAGAAAGCATCATCAACCACTAATATAGTGGACGATCTTTCCTCGATTTTTGGAGCTGCTCCATCATCCGGAGAGTTTCAGGAAGTTGAAGGGGAAAGTGAAGAAAGACGAAGAGCCAGGCTGGACCGCCACCAGAGGGCTCAGGAGCGTGCGGCAAAGGCATTGGCTGAGAAGAATCAACGGGACCTACAAACTCAAAGAGAACAAGCTGAGAGACACAGGCTTGCTGAAACACTGGATTTTGAAATTAAGCGCTGGGCTGCAGGGAAAGAGGGCAACTTGCGTGCTTTACTATCCACCTTGCAATATGTGCTGTGGCCTGAATGTGGTTGGCAGCCAGTTTCTTTGACTGATTTGATTACAGCTGCTGCTGTTAAAAAGGCTTATAGGAAAGCTACATTGTGCATTCATCCTGATAAAGTACAGCAAAAGGGTGCAACTCTTCAACAGAAATATGTTGCTGAGAAGGTGTTTGATCTCCTCAAGGAAGCATGGAATAAGTTCAATTCAGAGGAGCTTTTCTAA 2772 0.4722 MNDFDGLLTTDFGFKPQGKAAPMAASKPQSSSLNFDLGSRSTRSFNDSVNAASFDDLFGAHAKSDSSFNLDSMFRASSDFASKSVNLPVNDKPVFDKPVYDDDDIFDGVPGLKSSSSKVSYDSVFAAGGSNAAFDDLLGGFGKSKKSEEEKGVADFDDLIPGFGSSKPSADRTTPDIDLSSEPTVSASKSASSATEDPFKVFESTSAPVDSSSGYLTDPLEEISKFTSSRSPKNESSSNSNGGVYDDIDPFGGLGNSVPAFSAERNSSKRSNSPTPRSNASSSWSRDKESNDKASVRSPERRTQSKIPVDRDQGFHQAAFDMPTYSSDSYKPVGQRSTSPLYDNDGFKQANSQADMSPKYEEKFESNDDIWLTVSEIPLFTQPTAAPPPSRPPPPRPVHIPKSGTVLPASANARMKANEYSFSSSTQFSQGPNSAPAAAKFSSSQFDELEDFAMGRSRGNDDERGNVLSDEELEMNSAAAAMKEAMDRAEAKFRHAKEVRERENTKTGKSKDPMQFEKDERTVSEDRGKQERLDHERQQKEREEKEQRRREKEKEEKEREQQRLERERERARQAVERATREARERAAAEARQRAERAAVEKANAEARERAERAAVQRAQAEARERAAAEAKERAEKAAAEAKEREARGRAAAARAEAEAEARVKAERAAVERAAAEARERAAAEARERAAAAARMNQQQNENDLESFFSMGARASSAPRPPRPSSSDSVFDAQFQSDVTRKSTSVSSSMKKASSTTNIVDDLSSIFGAAPSSGEFQEVEGESEERRRARLDRHQRAQERAAKALAEKNQRDLQTQREQAERHRLAETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVKKAYRKATLCIHPDKVQQKGATLQQKYVAEKVFDLLKEAWNKFNSEELF* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0413 923 MobiDBLite consensus disorder prediction 260 285 - -
Apr1g0413 923 Gene3D DnaJ domain 793 922 IPR036869 -
Apr1g0413 923 MobiDBLite consensus disorder prediction 451 470 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 381 754 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 719 754 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 382 401 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 416 441 - -
Apr1g0413 923 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 922 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 778 813 - -
Apr1g0413 923 CDD DnaJ 870 915 IPR001623 -
Apr1g0413 923 MobiDBLite consensus disorder prediction 320 356 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 167 213 - -
Apr1g0413 923 Coils Coil 790 822 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 286 309 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 770 813 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 149 364 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 1 32 - -
Apr1g0413 923 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 922 - -
Apr1g0413 923 Coils Coil 530 702 - -
Apr1g0413 923 Coils Coil 468 506 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 222 244 - -
Apr1g0413 923 MobiDBLite consensus disorder prediction 485 687 - -
Apr1g0413 923 ProSiteProfiles dnaJ domain profile. 858 922 IPR001623 -
Apr1g0413 923 SUPERFAMILY Chaperone J-domain 756 921 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0413 Apr-Chr1 5126838 5135357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0413 - - gmx:100814144 732.635