Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0401 ATGTTACTGCTTGGCTCTGTTGAGCTCTTGGGCGATATGCGTAAAGGAGTGGCAAAGTTTGATGCATCAGCATTAGTGAGTCTATGTAAAGAGAGGAAGGAGTTTATTAAAGCTGCTAAGTATTGTAGGTTTGATTTAGTTTCATCCTTTGTGTTGTACTTAGAATCCCTTTTGGAGTTAGGCAATGCCCTCAACAAATATGTGGAACAAGAGTTGGTGATCCTTGATGATTGCTGTGCCCAAATTTCTCTTTCTGATTTTGATCCATGCGAAGAAAATTTCCACTTGGGATTTCCCTCCTCTGACTCTGACTCTGATTTGCATTCGCTATTTAATCACTCCCAAAGTGAAGAGGAAGAGCCAAGAGGCCTTAATGATACCCCAGAAGTGCATGATAAATGGCACACTTGTAAACACCATTCTGCAGCATATGTAAAAAATAGAGGGAAGACAAGAGATAAGAGTTCAAATCAAGAATGGTCTCATTTGTCCTATAACAATCCTCATCGTGGCAATCAAGACAATACTCACATTCATGTGGACATGTCATGTGATGATCTTGGACAACATTTGCATAGTCAACCAATGTCATTTGGCAAAAGATGGGAAACTGCAAAAGGTGATCATTGGTTTCCTCAGCACATGAATCATAACTCTTTTGAAGGTCCAATGTCTTTTCCCTACAACAATGATTGGTATGCACATCATGGTACCGAAGTATTTCCAATAGCTGTGTCCCCTAGTTATGATGAAGTGTCCCAAAAGCATGGAATTGAGCAAAATAATCCTACTACTGTCTTATCTACTCCTCCTCCACCTCAAGTCTCTACATGGGACTTCTTATATCCATTTAGTATGAATTATGATGTTCCTTATGACCACGATTGCGATGTGAGAGAAATAAGAGAAAGAGAAGGCATTCCTGATTTAGAAGATGAAAGTGAACAAGGTCTAACTGTGTCAGATTTTAACCAGAAGGAAATTGGAAGTGGGATAAGGCATGACTCAGGTAGTGGAAATGTTCCACAGTTAAATGCTAATGAAGATGTGCTGTCAACCAAATGTAAAGAGCTTGAGGTTAGGGGAAAAACCGCTGAGAAAGAAATCAAGTGTAGCTTGGAGTCTAAGGCGCCGGAAGTCATATGGTCTGAGGCAGTAGAAACAACATCAGAGAGCTGTGAATCACTTGGAGTCTGTATTGGAAGAATGAGTCTTAAGGAAGCAATATTGGATATAAGGAATGAATTCAAATATCTATTTGATAGTGGTAAAGAATTCTCATCAGTTATTGAGGTGGGCAAGCTGCCACATCTTTCTAAAAGCTTCAAATTAAAGGGCCTTCCATCTTCTAGAGCAAGGCTGTTGTCCAATGCTGACATGCGAAACAATCAAGAGCATGTTTGTTGTGATCTTTCGAGTACTTTGGAGAAGCTTTATGTGTGGGAAAAGAAACTTTATCAAGAAGTAATGGGTGAAGAAAAACTTCGAATTCCCTATGATAAGAAGTACAAGAGGCTAAAAGAATTGGATAGTAGAGGTTCTGAGTCAGATAGGATTGATGAAACTCTTGCTTCTATCAAACTTTTACATTCAGAAATAAATGTATCTGTTGCATCAATCAGTTCAATATCAAGAGAGATAAATGAGCTAAGAGATAATAAGCTGCTTCCTGAAGTAAACAAATTGATTGAAGGATTGATGTAA 1704 0.3867 MLLLGSVELLGDMRKGVAKFDASALVSLCKERKEFIKAAKYCRFDLVSSFVLYLESLLELGNALNKYVEQELVILDDCCAQISLSDFDPCEENFHLGFPSSDSDSDLHSLFNHSQSEEEEPRGLNDTPEVHDKWHTCKHHSAAYVKNRGKTRDKSSNQEWSHLSYNNPHRGNQDNTHIHVDMSCDDLGQHLHSQPMSFGKRWETAKGDHWFPQHMNHNSFEGPMSFPYNNDWYAHHGTEVFPIAVSPSYDEVSQKHGIEQNNPTTVLSTPPPPQVSTWDFLYPFSMNYDVPYDHDCDVREIREREGIPDLEDESEQGLTVSDFNQKEIGSGIRHDSGSGNVPQLNANEDVLSTKCKELEVRGKTAEKEIKCSLESKAPEVIWSEAVETTSESCESLGVCIGRMSLKEAILDIRNEFKYLFDSGKEFSSVIEVGKLPHLSKSFKLKGLPSSRARLLSNADMRNNQEHVCCDLSSTLEKLYVWEKKLYQEVMGEEKLRIPYDKKYKRLKELDSRGSESDRIDETLASIKLLHSEINVSVASISSISREINELRDNKLLPEVNKLIEGLM* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0401 567 MobiDBLite consensus disorder prediction 101 131 - -
Apr1g0401 567 MobiDBLite consensus disorder prediction 111 131 - -
Apr1g0401 567 MobiDBLite consensus disorder prediction 158 173 - -
Apr1g0401 567 Pfam Protein of unknown function (DUF632) 405 567 IPR006867 -
Apr1g0401 567 Pfam Protein of unknown function (DUF630) 18 71 IPR006868 -
Apr1g0401 567 PANTHER BNAA10G08300D PROTEIN 15 566 - -
Apr1g0401 567 MobiDBLite consensus disorder prediction 145 176 - -
Apr1g0401 567 PANTHER UNCHARACTERIZED 15 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0401 Apr-Chr1 5023209 5025507 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0401 457 566 Acyl Lipid Metabolism Gene Families AT2G27090 49.091 2.92e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0401 - - aprc:113869121 1145.95