Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0387 ATGTACTCGAGCAATTTGACTGGGTTCCTCTTAGCTGTAGTATCAAGCGCTTTCATCGGCTCAAGCTTTATCATCAAGAAAAAGGGTCTTCAACGTGCTAGCGTCAACGGAACTCCAGCTAGTGGTGGCGGCTATGGCTATCTGCTACAACCTCTTTGGTGGCTCGGAATGGTTACCATGATTGTTGGAGAAATAGCGAATTTTGTGGCTTACGTCTATGCTCCCGCGGTGCTTGTCACACCGCTTGGTGCTTTGAGTATTATTGTTAGTGCCGTCTTGGCGCATTTCATGTTGAATGAGAAGCTGCAGAAAATGGGCGTGCTCGGGTGTCTTTTGTGCATTGTGGGATCAACTGTGATTGTGCTCCATGCACCTCAAGAAAAGTCTATTGGTTCTGTTCAAGAAATATGGCAATTGGCTATTCAGCCAGCATTCCTGTTGTACACTGCCTCGGTGATGGCTGTAGCAATCTTTTTGATTTTGTATTGTGCGCCTCGCTATGGCCAAACTAATATTTTAGTTTATATTGGAATATGCTCCATAATTGGTTCCTTGACTGTCATGAGCGTGAAAGCTATTGGCATTGCTTTAAAACTTACGTTGGAGGGTGCAGATCAGTTTGTTCATTTTCAGACATGGATTTTTATGATGGTTGCTATTTCCTGCATCGTTACTCAATTAAATTACCTTAATATGGCATTGGATACATTTAACACAGCAGTTGTTTCTCCAATCTATTATGCCTTGTTTACATCTTTTACAATATTAGCTAGCGCAATCATGTTTAAGGACTATTCTGGTCAAAGTGTAACCAGCATTGCATCAGAGCTATGTGGTTTCATAACTGTTTTATCTGGAACAACTGTATTACACTGTACAAGAGAGCCAGATCCTCCAGTCAGTACAGATTTATACAGTCCTTTATCTCCAAAAGTATCATGGTATATTCAAGGCAATGGCGAACCTTGGAAACAGAAGGAGGAAGATGGATCACCCTTCAATTTAATTACAGTTATCCGGCAAGACCATTTCAAGTGA 1038 0.4152 MYSSNLTGFLLAVVSSAFIGSSFIIKKKGLQRASVNGTPASGGGYGYLLQPLWWLGMVTMIVGEIANFVAYVYAPAVLVTPLGALSIIVSAVLAHFMLNEKLQKMGVLGCLLCIVGSTVIVLHAPQEKSIGSVQEIWQLAIQPAFLLYTASVMAVAIFLILYCAPRYGQTNILVYIGICSIIGSLTVMSVKAIGIALKLTLEGADQFVHFQTWIFMMVAISCIVTQLNYLNMALDTFNTAVVSPIYYALFTSFTILASAIMFKDYSGQSVTSIASELCGFITVLSGTTVLHCTREPDPPVSTDLYSPLSPKVSWYIQGNGEPWKQKEEDGSPFNLITVIRQDHFK* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0387 345 Pfam Magnesium transporter NIPA 5 295 IPR008521 GO:0015095|GO:0015693|GO:0016021
Apr1g0387 345 PANTHER UNCHARACTERIZED 1 345 IPR008521 GO:0015095|GO:0015693|GO:0016021
Apr1g0387 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 124 - -
Apr1g0387 345 PANTHER MAGNESIUM TRANSPORTER-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0387 Apr-Chr1 4850292 4857418 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0387 K22733 - gmx:100783541 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1081 2 17157754 17162935 Apr1g0387 1 4850292 4857418 ECH
Apr1g0387 1 4850292 4857418 Apr1g0387 1 4850292 4857418 ECH
Apr2g1081 2 17157754 17162935 Apr1g0387 1 4850292 4857418 PCT