Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0386 ATGGCAGCACCTTCAAATTCAAAGATTGAGTTCTTGGTGTGGCTGTCGCAAGTCATGGGAGGCCTCTGTTCGAGGTCCACAGAGGATGATCCCGTGTTCATCACCGCCGATGCTCCTCCCGATAATAAGGTCGCCGTTTTCACCACCGCGCCTCAGAGAATGGAGAGGACTCTTCCAGAACCTTCTCGAACCATTACGGATGAAGATTTCTACGACGGAATTCCGCGCTTCGCCGATGATTCTTTGCCTCACAAGTCTAGGTCTAAGGTCTCAGAGGTGAGTTCACGCCTGGGCAGAGCTGGTACTATTGGACTTGGGAAGGCAGTAGAGGTTCTGGACACTCTTGGGAGTAGCATGACAAATTTAAATGCTGGCAGTGGCTTTGTTTCTGGAGCTGCAATAAAGGGGAATGAAATTTCTATCTTAGCATTTGAGGTTGCAAACACAATTGTCAAAGGTTATAATCTTCTGCAATCTCTTTCCACTAAAAGTATCAGGCATTTAAAAGAAGAGGTGCTTCTTTCAGAGGCTGTGCAAGATTTAGTATCAAAGGATATAGATGAACTTCTTAGGATTGTTGCTGCGGACAAGAGGCAGGAGTTGAAAGTTTTTTCTGATGAGGTGATTCGTTTTGGAAATCGTTCAAAGGATCCTCAGTGGCACAACTTAGACCGTTACTTTGAGAAGATTAACAAAGAACTAAATGCGCAAAGACTGTCAAGAGATGAGGCAGAATCAATAATGCAACAATGGATGACTTTGGTTCAGTTTACAGCTGAATTGTACCATGAATTACATGCTTTGGATAGATTTGAACAAGATATTCAGCGTAAGTGTGAAGAGGAGGATCAAAGAGGCGATAACCTTGCATTCTTGAGGGCGGAAATTAAAAGTCAAAAGAAGCAAATTAAGCATTTAAAGAAAAAATCCCTCTGGTCTAGAAGTTTGGAGGAGGTTATGGAGAAGCTTGTAGACATTGTCCATTTTTTGCATTCAGAGATAAGCAATGCCTTTGGCAGTGCAGATAGCCACAAACCATTAATTGGACTCAAGAGCAATCGCCAAAGATTGGGCCCTGCAGGACTTGCTTTGCATTATGCAAACATGGTGCTTCAAATTGATACTCTTGTAGCCAGATCCAGTTCTATGCCTGCAAATACAAGGGATGCATTATATCAAAGCTTGCCTCCTAATATAAAATTAGCTCTGCGTTCCAAATTACCGTCATTTCATATTGCAGAAGAGCTAACTGTAGCAGATATCAAAGATGAGATGGAGAAAACATTACATTGGTTGGTTCCAATGGCCACTAACACATCCAAAGCACATCATGGATTTGGTTGGGTAGGGGAGTGGGCAAACACAGGCTCTGAGTTAAACAGGAAGACCTTGCAGACTGGTGTAATACGGATCGAGACATTCTACCATGCAAATAAGGACAAAGTAGAATATTATATTCTTGAACTTCTTTTATGGCTTCATCGCTTGGCCATCAGAAATAAGGCTGGCAGTGATGGCAAAGTGAGGCCTGCCATCAAGTCCCCTGCTGGTGCTGCCTTGCAAAAGACAGATAAGCACTCTGCAAATGCACTTTTACCATTGTTAACAATCGATGAGCAAAAGATGTTGCAGGATGTAAATAGGAAATTACCAATTAGACGGATCAGTAAAAGCTTGGACTTGGACAGTATGAAGATTGGATTCAGGGAGAACTGCAGACTGACCAAGAGTAGCAGTCATTCGTCAAGTAAAAGCAAGGAAATATCTTTTAATAGAATTTTATCTAAGCTTCCTGTGATTGATTTTGATATTGACAAAGAAAGAGCATTGAACGTGATCGACAGACTGGATGTGGTCAGATAA 1863 0.4214 MAAPSNSKIEFLVWLSQVMGGLCSRSTEDDPVFITADAPPDNKVAVFTTAPQRMERTLPEPSRTITDEDFYDGIPRFADDSLPHKSRSKVSEVSSRLGRAGTIGLGKAVEVLDTLGSSMTNLNAGSGFVSGAAIKGNEISILAFEVANTIVKGYNLLQSLSTKSIRHLKEEVLLSEAVQDLVSKDIDELLRIVAADKRQELKVFSDEVIRFGNRSKDPQWHNLDRYFEKINKELNAQRLSRDEAESIMQQWMTLVQFTAELYHELHALDRFEQDIQRKCEEEDQRGDNLAFLRAEIKSQKKQIKHLKKKSLWSRSLEEVMEKLVDIVHFLHSEISNAFGSADSHKPLIGLKSNRQRLGPAGLALHYANMVLQIDTLVARSSSMPANTRDALYQSLPPNIKLALRSKLPSFHIAEELTVADIKDEMEKTLHWLVPMATNTSKAHHGFGWVGEWANTGSELNRKTLQTGVIRIETFYHANKDKVEYYILELLLWLHRLAIRNKAGSDGKVRPAIKSPAGAALQKTDKHSANALLPLLTIDEQKMLQDVNRKLPIRRISKSLDLDSMKIGFRENCRLTKSSSHSSSKSKEISFNRILSKLPVIDFDIDKERALNVIDRLDVVR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0386 620 PANTHER DUF668 FAMILY PROTEIN 10 620 - -
Apr1g0386 620 Pfam Domain of unknown function (DUF3475) 141 197 IPR021864 GO:0045927
Apr1g0386 620 Coils Coil 289 309 - -
Apr1g0386 620 Pfam Protein of unknown function (DUF668) 356 440 IPR007700 GO:0045927
Apr1g0386 620 PANTHER OS01G0873900 PROTEIN 10 620 IPR045021 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0386 Apr-Chr1 4839517 4846642 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0386 - - gmx:100779607 960.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0386 1 4839517 4846642 Apr1g0386 1 4839517 4846642 ECH