Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0380 ATGAACTCTCCTACTCATGTCGCTTCAACACCATCTTCTTCTTCCTCCTACAAGCTTCGTCCTCCTCCATGCCTCAGTCGCGCTTCTTGTAACCTCAAGTGTCCTCTGTTGTTGCCGCAAACAATCTGTAACTCTCAAAAGAAGTACCGCTGCTTTGGAGCTCATGTGGAAGCTTCTAATTCTATTAACACTAATCCCTTAAAAAATTACGTATCAGCTAGATGTTCTCCATGGTGGTCTGAAGCACAACCGCTGGCTTCTAACCAATCACTCAACAAACAGTTGTTCTCAGCAGGAGCTTTAGTAAATCCAACAACTCAAGATGTTTCTGATACAGCTCTTATTGGTGATGATAAGGTTGGCGTGTTATTGTTAAACCTTGGAGGTCCAGAGACACTAGAAGATGTCCAGCCTTTTTTGTTTAACCTTTTTGCTGACCCGGATATAATACGATTGCCAAGGATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTGTCTGTTGTAAGGGCCCCTAAAAGCAAAGAAGGCTATGCTTCAATTGGTGGTGGCTCTCCTCTTAGACGTATGACTGATGCGCAGGCTGAAGAGTTGATGAAATCTCTTTGGGCAAAGAATGTCCCGGCTAAAGTGTATGTTGGCATGCGATACTGGCATCCATTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTATTCTTCCACTTTATCCACAGTTTTCAATATCAACCAGTGGCTCAAGCCTACGTTTACTGGAGAATATATTCCGAGAGGATGAATATCTAGTCAACATGCAGCACACTGTAATACCTTCGTGGTATCAACGTGAAGGATACATTAAGGCTATGGCAAATTTAATTGAAAAAGAGCTGAAGGGTTTCAAACGCCCTGAGGAGCTTGTGAGTCCAAGTAATTCCTGCTCATTGCAGGTCATGATATTCTTTAGTGCACATGGGGTACCTCTTGCTTATGTGGAAGAGGCTGGTGATCCATACAAGGCTGAGATGGAGGAATGTGTGGATTTGATAATGGAAGAACTTGAGGCACGAAAGATAAATAATTCCTTCACTCTAGCTTATCAGAGTAGAGTTGGACCGGTGGAATGGTTAAAACCCTATACAGACGAGACAATAGTTGAGCTTGGAAAAAAGGGTGTGAAAAGTTTGTTGGCTGTTCCTATTAGCTTTGTCAGCGAACATATTGAAACTCTAGAAGAAATTGATGTGGAATACAAAGAATTGGCTCTAGAATCTGGCATAGAAAAGTGGGGCCGTGTTCCTGCTTTAGGATGTGAACCCACATTCATTTCTGATTTGGCAGATGCTGTTATTGAGAGTCTCCCATATGTTGGTGCCATGGCAGCTTCAAACCTTGAAGCTCGGCAGTCTCTGGTTCCACTTGGCAGCGTAGAAGAGTTATTGGCAACATATGATTCACAACGCAGGGAGTTACCTCCTCCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCTATGCTGGCTGTGCTGCTTCTTTTGTTTCTACAAGTCACGGCAGGTGAGGAGGGTCTTCTGCACCAGTGGGGAACATGGCCCTCTATTAGGTGA 1635 0.4336 MNSPTHVASTPSSSSSYKLRPPPCLSRASCNLKCPLLLPQTICNSQKKYRCFGAHVEASNSINTNPLKNYVSARCSPWWSEAQPLASNQSLNKQLFSAGALVNPTTQDVSDTALIGDDKVGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSVVRAPKSKEGYASIGGGSPLRRMTDAQAEELMKSLWAKNVPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVILPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKGFKRPEELVSPSNSCSLQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEARKINNSFTLAYQSRVGPVEWLKPYTDETIVELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIEKWGRVPALGCEPTFISDLADAVIESLPYVGAMAASNLEARQSLVPLGSVEELLATYDSQRRELPPPVIVWEWGWTKSAETWNGRVAMLAVLLLLFLQVTAGEEGLLHQWGTWPSIR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0380 544 PANTHER FERROCHELATASE 67 465 IPR001015 GO:0004325|GO:0006783
Apr1g0380 544 Hamap Coproporphyrin III ferrochelatase [cpfC]. 118 454 IPR001015 GO:0004325|GO:0006783
Apr1g0380 544 MobiDBLite consensus disorder prediction 1 20 - -
Apr1g0380 544 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 67 465 - -
Apr1g0380 544 ProSitePatterns Ferrochelatase signature. 320 341 IPR019772 GO:0004325|GO:0006783
Apr1g0380 544 SUPERFAMILY Chelatase 118 460 - -
Apr1g0380 544 CDD Ferrochelatase_C 288 437 IPR033644 -
Apr1g0380 544 Gene3D - 119 453 - -
Apr1g0380 544 CDD Ferrochelatase_N 120 282 IPR033659 -
Apr1g0380 544 MobiDBLite consensus disorder prediction 1 21 - -
Apr1g0380 544 Pfam Ferrochelatase 119 453 IPR001015 GO:0004325|GO:0006783
Apr1g0380 544 SUPERFAMILY Chlorophyll a-b binding protein 498 540 - -
Apr1g0380 544 Gene3D - 281 435 - -
Apr1g0380 544 TIGRFAM hemH: ferrochelatase 118 454 IPR001015 GO:0004325|GO:0006783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0380 Apr-Chr1 4742792 4748536 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0380 K01772 - gmx:100785669 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0380 1 4742792 4748536 Apr1g0380 1 4742792 4748536 ECH
Apr2g1090 2 17244530 17250573 Apr1g0380 1 4742792 4748536 PCT