Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0379 ATGAGAGCTTCCAAAAAATGCTTCTCTTGGTCTACTTGTTGGTCTTATCATCACATTGTGGCACTCTTCTTTATTATAACTTCACTAGTTGTTGTTTCTTGTGGTCTTCGAGCTTCAAAGTTCTCGTCATTTGTTGTTTCTTGGAGTTGGAGGGGAGAACCAACTTCCCCTTTGGATATAGAAAGTAAAAGCGTTTCAACATTATATGATGATGTTGAGGCTCCATATACATCTGCATTTCCTTCAAATCATGATGAATCTAGAGAAAACAATGAGGGTGATGAAAAGCTTGACACCAAGTTTAAGCATAAAGGTAAAGAAAAAGGGAACCTTAGAGCTCACAAGTACAACAAGTTGAAAAATATTGAAGGTAGATTGGCTAAAGCAAGGTGTTCCATCAGAGAAGCTAGCAAAGTTCGAAATTTTACATCAACCCTCCAAGATCCAGACTATGTTCCTCAAGGTCCAATTTACAGAAACGCTAATGCCTTTCATAGGAGTTACCTAGAGATGGAAAAGGTGTTCAAGATTTTTGTGTATGATGAAGGGGAGCCACCGATGTTTCACAATGGTTTAACCAAAAGCATATACTCCACGGAGGGAAGATTCATAAATGAAATGGAAAAGGGGAGGTACTATCGTACTAATGATCCAGATGAAGCTTTTGTGTATTATCTGCCCTTCAGTGTGGTCATGATGGTCGAATATCTATACGTGCATGGCTCCAATATAAATCCCATTGGCCTTACTGTAGAAGACTACATACAAATTATATCCAATAAACATCCCTTCTGGAATCGATCCCTGGGCCATGATCATTTCATGCTCTCTTGCCACGATTGGGGTCCAATTGCATCTACCTACGTGGATCACTTGTTCAACAATGCCATAAGGGTTCTTTGCAACGCAAATACTTCTGAAGGATTCAAGCCAGCAAAGGATGTGTCATTTCCTGAGATTAATCTTATAACAGGAGAAATCACAGGTCTAATAGGAGGGTACCCCCCATCTCAAAGAACCATCCTTGCTTTCTTTGCAGGTCGCCTACATGGCCATATAAGACACTTACTCCTTAAAGCATGGAAAGACAAAGACCAAGATGTGCAAGTCTACGAGGAACTTCCTCAAGGAGTTTCTTATTACACAAAGCTTAGAAGCAGCAAGTTTTGCCTGTGCCCAAGTGGTTATGAAGTTGCTAGTCCCAGAATAGTGGAAGCAATATTTGCAGAATGTGTGCCTGTCCTAATTTCTGATAGCTATGTTCCACCCTTTAGTGATGTTTTGAATTGGAAATCATTTTCAATTCAAGTGGACGTGAAAGAAATTCCCAACATCAAAAAGATACTAATGGGCATTTCACAAAGGCAGTACTTGAGGATGTTGAAGCGAGTAAAACAAGTGCAAAGGCATTTTGTGCCTAATGAGCCTCCAAAGAGGTTCGATGTGTTCCACATGACTATCCATTCCATTTGGCTTAGGAGGTTGAATGTCCATATTCAAGATCATTAA 1509 0.3996 MRASKKCFSWSTCWSYHHIVALFFIITSLVVVSCGLRASKFSSFVVSWSWRGEPTSPLDIESKSVSTLYDDVEAPYTSAFPSNHDESRENNEGDEKLDTKFKHKGKEKGNLRAHKYNKLKNIEGRLAKARCSIREASKVRNFTSTLQDPDYVPQGPIYRNANAFHRSYLEMEKVFKIFVYDEGEPPMFHNGLTKSIYSTEGRFINEMEKGRYYRTNDPDEAFVYYLPFSVVMMVEYLYVHGSNINPIGLTVEDYIQIISNKHPFWNRSLGHDHFMLSCHDWGPIASTYVDHLFNNAIRVLCNANTSEGFKPAKDVSFPEINLITGEITGLIGGYPPSQRTILAFFAGRLHGHIRHLLLKAWKDKDQDVQVYEELPQGVSYYTKLRSSKFCLCPSGYEVASPRIVEAIFAECVPVLISDSYVPPFSDVLNWKSFSIQVDVKEIPNIKKILMGISQRQYLRMLKRVKQVQRHFVPNEPPKRFDVFHMTIHSIWLRRLNVHIQDH* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0379 502 MobiDBLite consensus disorder prediction 76 97 - -
Apr1g0379 502 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 99 499 IPR004263 GO:0006486|GO:0016757
Apr1g0379 502 Pfam Exostosin family 172 450 IPR040911 -
Apr1g0379 502 Coils Coil 119 139 - -
Apr1g0379 502 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Apr1g0379 502 PANTHER OS07G0188700 PROTEIN 99 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0379 Apr-Chr1 4736775 4739243 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0379 - - aprc:113868893 1019.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g1115 2 17420989 17424673 Apr1g0379 1 4736775 4739243 PCT