Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0342 ATGGGTACGGGTTCAGATTCCAATGGATGGAACCGTGCTCGAGGGTTAGCCGTTAAGACTCTGCTACTCATTGGTGGTGCACTTCTCGTCAAGCGACTCCGCAAGTCCACCACGCGTTGGGACCATGCTCGCTTTGTCACCAAGTCCCTCACCGGCCAAAGGTATTCAAAGGAGCAAGCTTCTAGAGACCCTGATAACTATTTTAATATTAGAATGCTTACGTGTCCTGCAGCAGAGCTAGTGGATGGTTCTAAGGTCTTGTATTTTGAACAGGCTTTTTGGAGAAGTCCACAAAAACCCTTTCGGCAGAGGTTTCTTATGGTGAAACCTTGTCCTAAAGAGTTGAAATGTGATGTTGAGTTGAGTACTTATGCAATTAGGGACATGGAGGAGTACAAAAATTTCTGTGATCGACCGAAGGATCAGCGTCCACAGCCAGAAGAAGTGATTGGGGATATTGCAGAACATTTAACAACAGTACATCTTAAGCGATGTCCACGTGGAAAACGTTGCTTATATGAAGGTTCAACGCCACCTGGTGGATTTCCTAATTCATGGCAGAATGGGGCAACCTACTGTACTTCAGAACTTGCAGTTATGAAAAACAATGAGATACATACCTGGGATAGGGGTTATGATGACGATGGCAATCAAGTTTGGGGACAAAAAGAAGGCCCTTACGAGTTCAAGCTTGCACCAACCTCCAGTTTTAATGATATGTTTTCTCCCTTGAATTTTCCCCCTCCACCATCCATGGAGAGAAGAATAGAGGGTTCATTCGTTTTACAAGAATGA 795 0.4465 MGTGSDSNGWNRARGLAVKTLLLIGGALLVKRLRKSTTRWDHARFVTKSLTGQRYSKEQASRDPDNYFNIRMLTCPAAELVDGSKVLYFEQAFWRSPQKPFRQRFLMVKPCPKELKCDVELSTYAIRDMEEYKNFCDRPKDQRPQPEEVIGDIAEHLTTVHLKRCPRGKRCLYEGSTPPGGFPNSWQNGATYCTSELAVMKNNEIHTWDRGYDDDGNQVWGQKEGPYEFKLAPTSSFNDMFSPLNFPPPPSMERRIEGSFVLQE* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0342 264 Pfam CpeT/CpcT family (DUF1001) 46 230 IPR010404 GO:0016829|GO:0017009
Apr1g0342 264 Gene3D CpcT/CpeT domain 42 239 IPR038672 -
Apr1g0342 264 CDD CpcT 46 230 IPR010404 GO:0016829|GO:0017009
Apr1g0342 264 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 3 264 IPR010404 GO:0016829|GO:0017009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0342 - - ccaj:109806559 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0342 1 4161756 4173146 Apr1g0342 1 4161756 4173146 ECH