Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0335 ATGGATCGGAGAAGAACCGCGAGTCCGGTGTACACGCGGCAGTGGAGCGGCGGTTCCAGCAGCACCGGCTCCTCGTCGCCGGCGATGTCACCGGCTCATCCTCAGTCTCGGCTCGGTCCTTCTTCCACCGGCCTCTCCACCGTCAAGCGTACCCAAAACGTAGCCGCCAAAGCTGCCGCGCAGCGTCTGGCTCGCGTCATGGCGTCTCAGACCACCGCCGATGACGACGGCGATGAAGACGACGATCTCGGTTTCCGGTACAGCGCTCCGCCTCCAACGGCTCTTTCTTCTTTCTCCACCAACGCCAACAGTAACAAGAGTGCTAGCGCTAATGCCACCGCCACCATCCCTCCGATTTCGGTCGCGAGGCCAAACAGATCTCCTTCTCCTTCGTTAGGTCGGAACTTTGTAGAGCATACACATTCGGTGCGCTCAACATCAGCTGGAAGATCAGCTGTTTCAGTTCGCTCAACGCCAGTGGTACCACCGAGCAAAACCACACTGCGAACGCCTATGGCTGTACCTCCTATTGACCCTCCTACCAATCGGAATAGAGAGAAAAGGTTTGCATCAGATATTGCTATCAGACCACTTAACTCAAAAGACACAGGAGATCAGCGCGAAGCTTCTGCACTCCGTGATGAACTTGATATGCTACAAGAAGAAAATGAGACTTTACTTGAAAAGCTAAGACAAGCAGAAGAAAAACGCCAAGAAGTGGAGGCCAGAGCTAGGGAACTTGAGAAACAGGTTGCTTCCCTTGGAGAAGGTGTATCACTGGAAGCTAAACTGCTGAGCAGGAAGGAAGCTGCTTTGCGTCAAAGAGAGGCTGCTCTCAAGGCTGCCCAACAAACCCAGAGTGGGAGAGATGAGGATATTGCAGCCCTTCGTGTGGAAATTCAGAACCTAAAAGATGATGCTGTGGCTGCTTTGGAACAACAGCAAGAAGCTGAAGCTGAAGCAAAGGCTCTTCGCACGATGACACAGAGAATGATTTTGACCCAAGAAGAAATGGAAGAAGTTGTTCTGAAGAGATGTTGGCTAGCCCGCTACTGGGGTCTCGCTGTAAAACATGGCATATGTGCAGATATAACACAATCCAAGCATGAACATTGGTCTTCACTAGCTCCTCTTCCTTTTGAACTTGTTGTCTCTGCTGGACAAAAGGCTAAGGAGGAATCTTGGAACAAAAGTGCTGATGGTCCAGATAGAAGCAAACTTGTTCGTGATCTGAATGATCTAGCTGGGGAAGGAAATATCGAGAGTATGCTTTCAGTTGAGATGGGTTTGAGGGAACTTGCTTCCTTAAAGGTTGAAGATGCTGTTGTTCTCGCATTAGCCCAACACAGACGGCCAAATTTGGTTCGGCAGTCTGTTTTAGACTCCAAATCACATGGTGATGCCAAATATTTGGAAGCATTTGAATTAAGTGAAGAGGAAGCAGAAGATGTTCTTTTCAAAGAGGCATGGTTAACTTATTTCTGGAGAAGAGCTTTATTTCATGGTGTGGAAGAAGATATTGCAGAAGAGCGGCTTCAGTTTTGGATTGCCCGTAGTGGGCAGTCACCAACTTCCCATGATGCTGTCGATGTGGAGCGAGGTTTGTTGGAGTTGAGGAAGCTGAGTATAGAACAGCAACTTTGGGAAGCATCTCGGAAGGGAATTGATCAGGCTCAGGTGTCAGATGCGAATCATAAACCTGCCACTGACTCTGATGCCTCATCCATGAAGCGCAAGATTCTCCCTATTCCTGCACTGGAATTCAATTAG 1770 0.4932 MDRRRTASPVYTRQWSGGSSSTGSSSPAMSPAHPQSRLGPSSTGLSTVKRTQNVAAKAAAQRLARVMASQTTADDDGDEDDDLGFRYSAPPPTALSSFSTNANSNKSASANATATIPPISVARPNRSPSPSLGRNFVEHTHSVRSTSAGRSAVSVRSTPVVPPSKTTLRTPMAVPPIDPPTNRNREKRFASDIAIRPLNSKDTGDQREASALRDELDMLQEENETLLEKLRQAEEKRQEVEARARELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKAAQQTQSGRDEDIAALRVEIQNLKDDAVAALEQQQEAEAEAKALRTMTQRMILTQEEMEEVVLKRCWLARYWGLAVKHGICADITQSKHEHWSSLAPLPFELVVSAGQKAKEESWNKSADGPDRSKLVRDLNDLAGEGNIESMLSVEMGLRELASLKVEDAVVLALAQHRRPNLVRQSVLDSKSHGDAKYLEAFELSEEEAEDVLFKEAWLTYFWRRALFHGVEEDIAEERLQFWIARSGQSPTSHDAVDVERGLLELRKLSIEQQLWEASRKGIDQAQVSDANHKPATDSDASSMKRKILPIPALEFN* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0335 589 Coils Coil 293 327 - -
Apr1g0335 589 MobiDBLite consensus disorder prediction 9 54 - -
Apr1g0335 589 MobiDBLite consensus disorder prediction 1 207 - -
Apr1g0335 589 Coils Coil 209 257 - -
Apr1g0335 589 Coils Coil 265 285 - -
Apr1g0335 589 MobiDBLite consensus disorder prediction 92 165 - -
Apr1g0335 589 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 557 IPR040321 GO:0000911
Apr1g0335 589 PANTHER MYOSIN 1 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0335 Apr-Chr1 4064634 4075382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0335 1 552 EF-hand Containing Proteins AT5G13260 58.156 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0335 - - aprc:113865708 1056.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0335 1 4064634 4075382 Apr1g0335 1 4064634 4075382 ECH