Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0324 ATGTATGCAGCGCCGCCTCCGGCGCCGGCGATCTCGGACGGCGGCGTTGCCGGAGATCCCGCTGGTCCTTCGCTGGTCAGAACATACCGCACCTGGAAAGGCAATAATGAATTTTTTCTTCAGGGGAGGCTTATATTTGGACCTGATGGGAAATCTATATTTTTGACAATCTTTCTTATCGTTGCCCCTGTTGCTGCTTTCACTGCTTTTGTGGCTGTGAATTTGTTGGATGATTTTCCTTATCACTCGGGATATTCAATATTGATCGTAGTTATTGTTCACACAATGTTTGTTCTGATCACACTTCTACTGACCTCAGGAAGAGATCCTGGCATAGTGCCTCGCAATGCTTATCCTCCAATGCTAGATGAAAGTGATGGGAGTTTCCATATCAACAATGAACAAAACCCACGGCAACATTTGCCACGAGCAAAGGAAATAATTGTGAATGGAGTATCTGTGAAGATAAAATATTGTGACACCTGCATGCTGTATAGACCTCCCCGCTGTTCTCATTGTTCAGTGTGTGATAACTGTGTGGAACGATTTGATCATCACTGCCCATGGGTGGGTCAGTGCATTGGATTGCGAAATTACCGGTTCTACTACATGTTCGTTTTCTCTGCAACACTTCTTTGCTTCTATATTCATGGATTTTGCTGGGTCTACATTGCGAAGATCATGGACTCACATGAAGTATCAATTTGGAAAGCAATGATCAAAACTCCTGCTTCCATTGCACTCATAATATACAGCTTCATTTCAGTTTGGTTTGTTGGTGGCCTCACTGTTTTCCATACATATCTAATCAGCACAAATCAGTCTACATATGAAAATTTTAGATACAGGTACGACGAACAAGTCAACCCTTATGACAAAGGGATAGTTAAGAACTTCAAAGAAATATTCTGCTCTGCCATTCCACCATCCAAGAACAACTTCAGGTCTAAGATTCCACTTCCAAAGGAAATATCAGATTCATCTAGAAGAAGGGTTGTTGAATCCCTGAGCCCTATGGTGAGAAAAACAGAAGATGATATAGAACTAGGGGTGCCAGTTTACAATGAGGTTGAGGAGGAAAGTGACTATAAAGATGAATTTAGCAATGATGAGGAACTTGGCAAGGGTAGTGAGATAAGTGACATGTCCGTGGATTTAAGTAGGATACTTCACACGGAAGGGGGGCAGAGACAAGTTGCTTCAATTCTAAGGCACTCATTGTGGGAAAGGAGCAGCAGAAAGTGGGACGCAAGTCCTAAAGTTCAGGACAGGATCACCAGTGACAGTAGTGATGAGCCTAGTGGTGGCAACTAA 1314 0.4307 MYAAPPPAPAISDGGVAGDPAGPSLVRTYRTWKGNNEFFLQGRLIFGPDGKSIFLTIFLIVAPVAAFTAFVAVNLLDDFPYHSGYSILIVVIVHTMFVLITLLLTSGRDPGIVPRNAYPPMLDESDGSFHINNEQNPRQHLPRAKEIIVNGVSVKIKYCDTCMLYRPPRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYMFVFSATLLCFYIHGFCWVYIAKIMDSHEVSIWKAMIKTPASIALIIYSFISVWFVGGLTVFHTYLISTNQSTYENFRYRYDEQVNPYDKGIVKNFKEIFCSAIPPSKNNFRSKIPLPKEISDSSRRRVVESLSPMVRKTEDDIELGVPVYNEVEEESDYKDEFSNDEELGKGSEISDMSVDLSRILHTEGGQRQVASILRHSLWERSSRKWDASPKVQDRITSDSSDEPSGGN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0324 437 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 19 427 - -
Apr1g0324 437 MobiDBLite consensus disorder prediction 413 437 - -
Apr1g0324 437 Pfam DHHC palmitoyltransferase 156 281 IPR001594 GO:0016409
Apr1g0324 437 PANTHER S-ACYLTRANSFERASE 19 427 - -
Apr1g0324 437 ProSiteProfiles DHHC domain profile. 157 207 - -
Apr1g0324 437 MobiDBLite consensus disorder prediction 413 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0324 Apr-Chr1 3909499 3913582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0324 86 329 Lipid Metabolism Gene Families AT4G22750 26.866 2.61e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0324 - - gmx:100791866 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0324 1 3909499 3913582 Apr2g1145 2 17714777 17723348 ECH
Apr1g0324 1 3909499 3913582 Apr1g0324 1 3909499 3913582 ECH