Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0323 ATGTCCCACAGTCCTATAACCTTCATCTTTGGTGTTCTAGGCAACATTGCCTCCTTCGTGTGCTTTCTGGCACCACTACCGACATTTTATAGAGTTTGTAAGAAGAAATCAACCGAAGGGTTCCAATCAATTCCGTATGTAGCTGCACTCTTCAGTGCAATGCTTTGGATTTTTTATGCCTATGTGAAGACCGGAGAAACGCTTCTTATCACAATCAATGCATTTGGTTGTGTGATAGAGACAATTTACCTTGCCATATTTATCACTTACTGCCCCAAGAAAGCTAGGATGTCGACCCTGAGGATGATTGTCTTGTTAAATTTTGGGGGATTTTGCACGATTGTCCTCCTAACCCACCTCCTGGCAAAAGGAGAAGGCCGTGTCAAGCTTCTTGGTTGGATTTGCGTTGTCTTTGCCACTAGTGTTTTCGCCGCACCTTTAAGCATTATTAGGGTGGTTATTCGCACCAAAAGCGTAGAGTTCCTTCCTTTTCCTCTTTCACTCCTCCTCTTGGTTAGCGCAATTATGTGGCTCTTATACGGGATTTCTCTGAAGGATATCTATGTCACGCTCCCGAACGTTGTGGGGTTAACGTTTGGAATCGTTCAGATGGTTCTCTACGCAATGTACAGAAACAAGAAGCCCGTAAAGGATGAGAAGCTCCCAGAACACAAAGGTGATATCAACAATGATGAAAACGTGGTTCCAAGTGTGACAGACGAGAATGAACAAGGGGTTGGAGACATCGAAATTGGGGGGAAGAAAGAAGAGAAGGAAGATGAACAACCTGAACCTGAGAAGAAACAGGACCAAGTTGTTGAAGACCAAACAGAGCTCAACGACAAGAAGAAAACAGGGGATCCGGAGAGAGAGAGTTGCCAAGTTTAA 888 0.4426 MSHSPITFIFGVLGNIASFVCFLAPLPTFYRVCKKKSTEGFQSIPYVAALFSAMLWIFYAYVKTGETLLITINAFGCVIETIYLAIFITYCPKKARMSTLRMIVLLNFGGFCTIVLLTHLLAKGEGRVKLLGWICVVFATSVFAAPLSIIRVVIRTKSVEFLPFPLSLLLLVSAIMWLLYGISLKDIYVTLPNVVGLTFGIVQMVLYAMYRNKKPVKDEKLPEHKGDINNDENVVPSVTDENEQGVGDIEIGGKKEEKEDEQPEPEKKQDQVVEDQTELNDKKKTGDPERESCQV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0323 295 Gene3D - 127 221 - -
Apr1g0323 295 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 284 - -
Apr1g0323 295 MobiDBLite consensus disorder prediction 247 295 - -
Apr1g0323 295 MobiDBLite consensus disorder prediction 218 295 - -
Apr1g0323 295 PANTHER RAG1-ACTIVATING PROTEIN 1 4 284 - -
Apr1g0323 295 Pfam Sugar efflux transporter for intercellular exchange 130 214 IPR004316 GO:0016021
Apr1g0323 295 Pfam Sugar efflux transporter for intercellular exchange 9 95 IPR004316 GO:0016021
Apr1g0323 295 Gene3D - 8 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0323 Apr-Chr1 3894303 3896530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0323 8 279 Miscellaneous Gene Families AT5G50800 52.797 1.03e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0323 K15382 - gmx:100791106 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0323 1 3894303 3896530 Apr2g1146 2 17732311 17734415 ECH
Apr1g0323 1 3894303 3896530 Apr1g0323 1 3894303 3896530 ECH
Apr2g1146 2 17732311 17734415 Apr1g0323 1 3894303 3896530 PCT