Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0322 ATGGCCATAAACCAAGAGTTTTGGGCTTTCGTTTTCGGCCTTCTAGGCAACGTCATCTCCTTTATGGTGTTCCTTGCTCCATTACCAACTTTTTACCAAATCTACAAGAAGAAATCTTCGGAAGGGTATCAGGCACTACCTTATATTGTTGCACTGTTCAGTTCAATGCTATGGATTTATTATGCACTCGTCAAAAAGGAGTCTAGCCTTCTTCTCATCACCATTAACTCCTTTGGATGTGTGATAGAAACAATTTATCTTGCCACCTTCCTTTTTTACGCACCAAATAAAACCAGGCTTTCGACCATCAAGATTCTTCTCTTGTTAAATGTGTTTGGGTTCGGAGCGATGCTACTTTCAACCCTCTATCTTACAACGGGATCCAAACGTCTTACTGTTATAGGATGGATTTCCCTCGTTTTCAACATAAGCGTATTTGCTGCTCCTCTCGGCATTATGAAACGTGTCATAAAGACGAAGAGCGTGGAATTCATGCCTTTCAGCTTGTCCTTCTTTTTGACCTTAAATGCTGTCATGTGGTTTTTCTATGGTCTTTTCCTCAAGGACTATTACATCGCTCTCCCAAATACGCTTGGGTTTCTATTCGGCATAATTCAGATGGTGCTGTATTTGATTTATAGAAAATCCAAGACAGTGACATTGGAGGTGCCAGTGAAGTTGCAAGAACTAAATGGTCATGTTATTGAAGTTGTGAAGCTGAGCACGATGGTACCCTCTGAGCCAAATCATATAACAGAAGATGGTGCCGTGGTTGTGACATCTGTTGAGGATCCAAATTGGGAAGAATCAGGAAAGGGAAATGTGAAGAACATCATGGATAATGCCGGCAGGGTTTGA 858 0.4138 MAINQEFWAFVFGLLGNVISFMVFLAPLPTFYQIYKKKSSEGYQALPYIVALFSSMLWIYYALVKKESSLLLITINSFGCVIETIYLATFLFYAPNKTRLSTIKILLLLNVFGFGAMLLSTLYLTTGSKRLTVIGWISLVFNISVFAAPLGIMKRVIKTKSVEFMPFSLSFFLTLNAVMWFFYGLFLKDYYIALPNTLGFLFGIIQMVLYLIYRKSKTVTLEVPVKLQELNGHVIEVVKLSTMVPSEPNHITEDGAVVVTSVEDPNWEESGKGNVKNIMDNAGRV* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0322 285 Gene3D - 10 98 - -
Apr1g0322 285 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 5 258 - -
Apr1g0322 285 Pfam Sugar efflux transporter for intercellular exchange 133 217 IPR004316 GO:0016021
Apr1g0322 285 Pfam Sugar efflux transporter for intercellular exchange 11 97 IPR004316 GO:0016021
Apr1g0322 285 PANTHER RAG1-ACTIVATING PROTEIN 1 5 258 - -
Apr1g0322 285 Gene3D - 129 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0322 Apr-Chr1 3873443 3876711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0322 1 281 Miscellaneous Gene Families AT5G50790 53.521 4.55e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0322 K15382 - gmx:100794434 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0322 1 3873443 3876711 Apr1g0322 1 3873443 3876711 ECH
Apr2g1147 2 17743402 17746104 Apr1g0322 1 3873443 3876711 PCT