Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0317 ATGGCCACCGAAACCCTAGAAGACAACAAACCACCACCTCAAGACAAAGACGACAACCACGCACCTCCCGACCCTAAATCCCAACCCAACAAACAAGACCCCGAAGACTTGGAAATTTCCGAGAAAGACGCTTCCTCGGAAGTCGCGAAATCCGAGGACAAGAATGTCGACGACAAAGACGGAGCGAGCAATATGGAAGTAGAAGAGGAAGCTGATGAGAAGAAAGACACCGACGAACACGAAGACGAGGAGAAGGACAATGAAGAAGAAGAGGAGGAAGAAGAAGAAGCTGAAGAAGGTAAGAAGGGCAAGGCCAAGGGGCGTAGTAAAGAGAGTACGAAGAAGAGTAAGAAGAAAACTGCGTCGGCGAAGAAGGGTAAAAAGGATCCAGTTACTCCCACAAGCGAGAGGCCAACGAGAGAGAGGAAAACTGTGGAACGTTACTCTGTACCCTCGCCTGCAAAGTCTGCAAGGTCCTCTGCTAGTAAAGCTTTCACGATTGAAAAGGGTCGTGGCACGCAGCTCAAGGATATACCGAACGTGGCTTTCAAGTTGTCTAAGAGAAAACCTGATGACAACCTGCACATGCTTCATAGTTTACTGTTTGGGAAGAAAACAAAGGCACACAATTTAAAAAGAAATATAGGCCAGTTTTCTGGTTATGTATGGACTGAAAATGAGGAAAAACAGAGGGCTAAGGTAAAAGAGAGGATTGACAAATGTGTCAAAGAAAAGTTGTTGGACTTCTGTGATGTTCTTAATATTCAGATAAACAAGGCCAACGTGAAGAAGGAGGAGCTGTCTGCAAAGTTGTTGGAATTTTTGGAGTCCCCACATGCTACAACTGATATTCTGCTTGCTGAAAAAGAGCAGAAAGGTAAAAAACGAACCAGAAAGGTAACTCCAATCAAATCTCCTGGTGAAGCATCTACAGAAACACCTGCCAAGAAGCTAAAACAAACTTCACAGTCTGGGAAAAAGCGAAAGCAGTCTTCTGATGATGAGGAGGATGATAAAGCTGAACTTTCAGATTCAAAAGATGAGTCTCAGGAAGATGAAGATGTTGCAGCGCTGAATAATGAAAGTGATGATGAGGAAAGTAAGTTAGAGGAAGAGGAAGATAAACCGAAAGCTTGCAAGCGTACTTCCAAAAAGATTGTTAAGGAGGGTTCAGTGACCAAAGCTGGAGATAGAGCCTCATCTGGCAAGAAGACCTCTGTAAAAGAGGCCAAGAGCACTGAAAAAACTCAGAAGAAGTCAACTTCAAAAAAGAGTGTTGCTGAGCATGACAGTGCTTCTGCTTCCCTTTCTAAGTCAAAGCAACCTGCATCCAAGAAACTGAAAACTGTAAGCGAAAAGGATACTAAGGGGAAGGCTGCCAGCAAAAAACAAACAGACAAGTCCTCAAAGGCTTTGGTTAAGGATCAAGGGAAAGGTAAAAGTAATAAGAAGTCTAAGACAGAACCTACTAGGGAGGACATGCATGCAGTAGTCGTTGATATTCTGAAGGAAGTTGATTTCAATACTGCAACTTTGTCTGATATCCTTAGGCAACTTGGTACCCACTTTGGTCTGGATTTAATGCATAGAAAAGCAGAGGTGAAGGATATAATTACAGATGTAATCAATAACATGTCTGATGAGGAAGATGAAGGAGAAGAAGCTGAGAATGACGGTGATGCAGATAAAGATGATGACGACGACGACGAGGATGCATGA 1719 0.4334 MATETLEDNKPPPQDKDDNHAPPDPKSQPNKQDPEDLEISEKDASSEVAKSEDKNVDDKDGASNMEVEEEADEKKDTDEHEDEEKDNEEEEEEEEEAEEGKKGKAKGRSKESTKKSKKKTASAKKGKKDPVTPTSERPTRERKTVERYSVPSPAKSARSSASKAFTIEKGRGTQLKDIPNVAFKLSKRKPDDNLHMLHSLLFGKKTKAHNLKRNIGQFSGYVWTENEEKQRAKVKERIDKCVKEKLLDFCDVLNIQINKANVKKEELSAKLLEFLESPHATTDILLAEKEQKGKKRTRKVTPIKSPGEASTETPAKKLKQTSQSGKKRKQSSDDEEDDKAELSDSKDESQEDEDVAALNNESDDEESKLEEEEDKPKACKRTSKKIVKEGSVTKAGDRASSGKKTSVKEAKSTEKTQKKSTSKKSVAEHDSASASLSKSKQPASKKLKTVSEKDTKGKAASKKQTDKSSKALVKDQGKGKSNKKSKTEPTREDMHAVVVDILKEVDFNTATLSDILRQLGTHFGLDLMHRKAEVKDIITDVINNMSDEEDEGEEAENDGDADKDDDDDDEDA* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0317 572 Coils Coil 250 270 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 287 494 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 543 572 - -
Apr1g0317 572 PANTHER DEK PROTEIN 57 567 IPR044198 GO:0003677|GO:0006325
Apr1g0317 572 MobiDBLite consensus disorder prediction 401 426 - -
Apr1g0317 572 Coils Coil 73 101 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 427 444 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 63 97 - -
Apr1g0317 572 Coils Coil 538 558 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 125 148 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 107 124 - -
Apr1g0317 572 Coils Coil 332 352 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 445 494 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 337 370 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 1 168 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 153 167 - -
Apr1g0317 572 Pfam DEK C terminal domain 489 541 IPR014876 -
Apr1g0317 572 Gene3D - 481 544 - -
Apr1g0317 572 Coils Coil 355 375 - -
Apr1g0317 572 PANTHER OS01G0924900 PROTEIN 57 567 - -
Apr1g0317 572 SUPERFAMILY DEK C-terminal domain 483 543 - -
Apr1g0317 572 Coils Coil 224 244 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 9 62 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 371 392 - -
Apr1g0317 572 MobiDBLite consensus disorder prediction 304 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0317 Apr-Chr1 3773372 3782831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0317 K17046 - gmx:100788998 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0317 1 3773372 3782831 Apr1g0317 1 3773372 3782831 ECH