Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0315 ATGGGCAAGTTTTGGACCTTGATTACCCAGCTTCATTCCATTGCTGGGCCGGTTTTGACGTTATTGTACCCTTTGTATGCTTCGGTGGTAGCAATAGAGAGCCCCTCCAAGTTGGATGACGAGCAATGGCTAGCTTATTGGATCATCTATTCCTTCCTCACCCTTGCTGAAATGGTTCTTGAACCCATTTTAGAGTGGATTCCAATTTGGTACGATGTAAAGCTATTGATGGTGGCATGGTTGGTGTTGCCACAGTTCAAAGGGGCTGCTTATATGTATGAAAGGTTCGTGAGAGAGCAATTAAGAAAACATGCAACGGAGAGGGAGCATCACCAGGTCCACCGCAACCAACAACAAAGCAAAAAGCCTCCCAACGGGGGCAAGACCAAGAAGAAGTTCGTGGAGTTCATCACACCCAAGAAAGGGGATCAGGAGGCGTATTGA 444 0.4707 MGKFWTLITQLHSIAGPVLTLLYPLYASVVAIESPSKLDDEQWLAYWIIYSFLTLAEMVLEPILEWIPIWYDVKLLMVAWLVLPQFKGAAYMYERFVREQLRKHATEREHHQVHRNQQQSKKPPNGGKTKKKFVEFITPKKGDQEAY* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0315 147 MobiDBLite consensus disorder prediction 133 147 - -
Apr1g0315 147 PANTHER HVA22-LIKE PROTEINS 1 147 IPR004345 -
Apr1g0315 147 Pfam TB2/DP1, HVA22 family 24 99 IPR004345 -
Apr1g0315 147 MobiDBLite consensus disorder prediction 105 147 - -
Apr1g0315 147 PANTHER HVA22-LIKE PROTEIN 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0315 Apr-Chr1 3739153 3740629 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0315 K17279 - gmx:100305818 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0315 1 3739153 3740629 Apr1g0315 1 3739153 3740629 ECH