Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0314 ATGGTGGCACCCAGCAATATTGGGCTACCATTTCGTGGAAATTTTCCCAATCCAAAAAAGAAAAGTGTGGACAAGGTTGGGGAGTTTCTGAAGATGAGCTTCAATTCTTCATGCAACACTTGTACATTGAACAATAAACAAAGGTTTTCATTGTTAGTGAGTGTAAGTTCTCCTTGTAGCCCTTGGAAAGTGAACTCAATCAATAAAATGAAACATGTGCTGTTGGCTCCTGGCATGTTGGCAAATGAAAGCAATGCAAAAACAGCCTCTGTTACCTTCTTGCGTGGAATGTTTGTGGAGGACAGGTTTGTATATAGGCAAATTTTTGTTGTCAGGTCTTACCAAATTGGATCAGATAAAACTGTCACTATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCAGGTCTCTAGTTGTGGGCTAAGTAAGAACGATTTTGGAATTACTCATGAGATGGACCTTCGCAAACTCATTTGGGTTGTTACTCGTATTCAAATTCAGGTCAAGAGATATAGCAAATGGGGGGATGAAGTTGAGGTTGATACTTGGTTTGATGCTGCCGGAAAGAGTGCAATCCGAAGAGACTGGATAATTAGGGATCATTATACCAAAGAGATGATAGCAAAAGCAACCAGCACATGGACAATCATGAATAGAGAAACAAGAAGATTATCCAAGATACCTGAAGAAGTTAGACAAGAACTTGCTCCTTTCTATTTTAATAGGATTTCCATTCCTACCGAAGAAATAGATCATCAAAAGATACACAAGCTCACCGATGACATTACCAAAACATTTCGATCTGGAATTGCTCCAAAGTGGAACGACATGGATGTTAATGAGCATGTTAACAATGTGAAATACATTGGATGGATTTTAGAGAGCATGCCAAGAGAAGTGCTAGATAATTATAATATGACAAGCATGACTATAGAGTTTCGACGTGAATGTACACAATCAAATGTGTTAGAATCTATGAGTAATCCATCATCTAGTGTGATTGGTGCCTCTGATAATAACTCTGTCAACAGAAAACCAGGCTTGCAATATACGCACTTGCTTCGTCTTCAAGATAATAAAGCAGAGTTGGTTCGAGCTAGAACGGAATGGAATCTGAAGCAAAAAAGATAA 1140 0.3842 MVAPSNIGLPFRGNFPNPKKKSVDKVGEFLKMSFNSSCNTCTLNNKQRFSLLVSVSSPCSPWKVNSINKMKHVLLAPGMLANESNAKTASVTFLRGMFVEDRFVYRQIFVVRSYQIGSDKTVTMETLMNFLQETALNQVSSCGLSKNDFGITHEMDLRKLIWVVTRIQIQVKRYSKWGDEVEVDTWFDAAGKSAIRRDWIIRDHYTKEMIAKATSTWTIMNRETRRLSKIPEEVRQELAPFYFNRISIPTEEIDHQKIHKLTDDITKTFRSGIAPKWNDMDVNEHVNNVKYIGWILESMPREVLDNYNMTSMTIEFRRECTQSNVLESMSNPSSSVIGASDNNSVNRKPGLQYTHLLRLQDNKAELVRARTEWNLKQKR* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0314 379 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 39 377 - -
Apr1g0314 379 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 39 377 IPR045023 GO:0006633|GO:0016297
Apr1g0314 379 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 99 247 IPR029069 -
Apr1g0314 379 CDD 4HBT 103 221 - -
Apr1g0314 379 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 267 373 IPR029069 -
Apr1g0314 379 Gene3D Hotdog Thioesterase 95 378 - -
Apr1g0314 379 Pfam Acyl-ACP thioesterase 104 374 IPR002864 GO:0006633|GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0314 Apr-Chr1 3729845 3732580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0314 93 376 Acyl Lipid Metabolism Gene Families AT1G08510 49.296 2.65e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0314 K10781 - gmx:100791811 548.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0314 1 3729845 3732580 Apr1g0314 1 3729845 3732580 ECH