Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0312 ATGACGCCAGTCTTAGCACTTAGCAACATTGGGTTACAATTTCGAGGGAATTTTTGCAATGCCAAAACGAAAATCGTAGACAACAAGGCAGGGGAATTTTCAGAGATTAGCCACAAATCTTCATGCAACACTTACATATTGAACAATAAACGAAGATTTTCATTGTTGGTGAGGGCAAGTTTTGATTGTAGCCCTTGGGGAGTGAGTACAATCAACGGAAGGGAACACATGGCATTGATTCCACATACAGCTATCAAATTGGCAAATGAAAGCACAACACAAACAACCTTTGATCCCTTTTTACTTGGAGTGTTTGTGGAAGACAAGTTTGTATATAGGCAGAGTTTTATAGTCAGGTCTTATGAAATCGGCCCCGATAAAACTGTCACCATATATGCACTCATGAATTTTCTCCAGGAAACTGCTATAAACAATGTCACTAGCTATGGAGTAAGTGGGAACAATTTTGCAACTACTCGGGAGATGGACCGTCACACGCTGATTTGGGTTGCTAATCGTATTCAAATTCAAGTACAAAAATATAGCAAATGGGGAGACAAAATTGATGTTGATACATGGTTTCATTTTGTTGGAAAAAATGGAATGAGAAGAGATTCGATAATCAGGGATCATTGCACCAAAGAGATTATAGCAAGAGCAACAAGCACATGGGCAATGATGAACAAAGAAACAAGAAGATTATCAAAGTTACCTGAATCAGTTAAACAAGAGCTTTTTCCTTTCCGCTATGATAGACATGCCATTTCTAGTGAAGAAATAGATTGTCAGAAGATACACAAGCTCACTGATGATACTGCTGAGACAATTCGATCTGGGATGACAGTAAGGAGGAATGACATGGATGCTAACCAGCATGTTAACAATGTGAAATATATTTCATGGATTTTGGAGAGTGTGCCAAGAGAAGTGTTAGATGATTATGATATCACAAGCATGACTTTGGAGTTTAGGCGTGAATGTACACAATCAAGCGTGTTAGAATCTATGACTAGTCCATCATGCAACGTGATAAGTGATTCTAATAATAGCTCTGTTGAGAGAAAACATGACTTGCAATACACACACCTACTTCGTCTGCAAGATAATAAAGCAGAATTGGTTCGAGGCAGAACAAAATGGCGTCTTAGGCAGAACCACAAGTGA 1164 0.3866 MTPVLALSNIGLQFRGNFCNAKTKIVDNKAGEFSEISHKSSCNTYILNNKRRFSLLVRASFDCSPWGVSTINGREHMALIPHTAIKLANESTTQTTFDPFLLGVFVEDKFVYRQSFIVRSYEIGPDKTVTIYALMNFLQETAINNVTSYGVSGNNFATTREMDRHTLIWVANRIQIQVQKYSKWGDKIDVDTWFHFVGKNGMRRDSIIRDHCTKEIIARATSTWAMMNKETRRLSKLPESVKQELFPFRYDRHAISSEEIDCQKIHKLTDDTAETIRSGMTVRRNDMDANQHVNNVKYISWILESVPREVLDDYDITSMTLEFRRECTQSSVLESMTSPSCNVISDSNNSSVERKHDLQYTHLLRLQDNKAELVRGRTKWRLRQNHK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0312 387 Gene3D Hotdog Thioesterase 103 385 - -
Apr1g0312 387 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 63 385 IPR045023 GO:0006633|GO:0016297
Apr1g0312 387 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 106 253 IPR029069 -
Apr1g0312 387 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 267 381 IPR029069 -
Apr1g0312 387 Pfam Acyl-ACP thioesterase 111 381 IPR002864 GO:0006633|GO:0016790
Apr1g0312 387 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 63 385 - -
Apr1g0312 387 CDD 4HBT 112 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0312 Apr-Chr1 3715571 3717912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0312 97 380 Acyl Lipid Metabolism Gene Families AT1G08510 49.296 3.87e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0312 K10781 - gmx:100791811 486.493