Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0306 ATGGAGAAGCCATCGTCGTCGTCGTCGTCGTCAGTGAAATCGATCACGAAGGTAAAAACTTCAAGCGATGTGAACACGAGCTTGAGTGTGCTTAACGAGGACCTTCTTCAGAACATTCTTGCTAGGCTTCCAGCACTACCCTTCGCTTCAGCTGCTTGTGTCAGCAAATCATGGAACTCTCTCTGCAATCGCATCCTCTCTCGTCCCAAACTCTCCTCTGCACTTTCTCTCAACCCTTCACTCCACGATGCTGTGAACGAGGTTATTCATAAGGTTCTGTCTGAGCCAATTCGACCGTGTTTCGCTATTGCCACCATTGGAAGTGGATTCGACTCGTTCAATACTATGCAGCGTATTAGACAGTCGTTGGGACCCAATATTCCGATTATTGTTACAGTGTCAAATGGTATTATGGGAAGGGATGCTATTACTGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTCAGTGGCTTTGGAGCTGAAGCATATGCGAGACATATAAATGAAGGCATAGTTTTGACCGTTGGCTACTTGCCTGGATTAAACGTTGAAGCCATACCATTACGACGGATGCGGAAGACATCTCAAGCGCCATGTGTTGACGATTTTGTAAAGGATATCAAGGAATATTCAGCCTCTGTCTCCAGTTGCTCATTCCCTGTTGGGATTATATTGTTTGGGGAAGCAAGCAGTGACATGAAATTGGTTCTAGAGAAGTTGGATTATGCCATGCCTATGGACACAGTCATTGTGGGTGATGAGAGAAGCTCCTTTGTATACCTAAGTAGAAATAATTCTAGAATTATTTGTGGTAGAGCAGGACTGGTAGAGGCTGTTGCTCTTGTATTTGCTCAGGACAGAGACAGATCTTCTGGAAATATTAGATTTCATGTTGCGTTGTCAAATGGTGTTACGGCTGTGGGTGCCAAATACAAGACAGCCTCAGTTAGAACAAACTGCAATGAAGGTTCAACATGGCTCACTGCTAGGAGGGAAGGGCAACAGGAACTTCTTGATGGTCAGACTATTCTACATGAAATTAACAATTTGATAGAAAATCATATTGAGTCTCCTGATTTGTACATTGGGGTAATTAAGCAAAGGAAATTCTCCATTGGAGCAGAGAAGCCATTCCCAAGAACTTGTATTGCTTATCACGGAATTGTGGGAGGTGATGAAGAGTATTTATATGTTGAAGGTATTGGCATCCGAACAGGAGATTTCTTTCAGTTCTACTATGCAGATCCTGATAATGCCTTGGCTTCATTAACGGAGGTCCATAGTGCCCTCAAGAATATTGAACCGGAAAAAAATTCTGAGAGTTTCAAGGGCAATGGGGACAATGCTAACAATGTTTTTGGGGGTCTTATTTTTGCTTGTTACGGCCGTGGTGAATCATTCTTTGGACGTCACAATGTTGATAGCTCCCCGTTCTTGGAGAATTTTCCGGGAGTTCCATTGGCTGGAATGTTTTGTTGTGGAGAATTGGTGCGTCCTTGTACCCCTTTGATTGGTCAATGTCAAGGAGCAAGCCGCCCTAGTTGCTGTTTGCATGTTTACAGCAGTGTTTACTTAGCAATGTCATATACTCCTCCCTCTGTGGAATATTAG 1614 0.4356 MEKPSSSSSSSVKSITKVKTSSDVNTSLSVLNEDLLQNILARLPALPFASAACVSKSWNSLCNRILSRPKLSSALSLNPSLHDAVNEVIHKVLSEPIRPCFAIATIGSGFDSFNTMQRIRQSLGPNIPIIVTVSNGIMGRDAITDEFKEVKWGALFSGFGAEAYARHINEGIVLTVGYLPGLNVEAIPLRRMRKTSQAPCVDDFVKDIKEYSASVSSCSFPVGIILFGEASSDMKLVLEKLDYAMPMDTVIVGDERSSFVYLSRNNSRIICGRAGLVEAVALVFAQDRDRSSGNIRFHVALSNGVTAVGAKYKTASVRTNCNEGSTWLTARREGQQELLDGQTILHEINNLIENHIESPDLYIGVIKQRKFSIGAEKPFPRTCIAYHGIVGGDEEYLYVEGIGIRTGDFFQFYYADPDNALASLTEVHSALKNIEPEKNSESFKGNGDNANNVFGGLIFACYGRGESFFGRHNVDSSPFLENFPGVPLAGMFCCGELVRPCTPLIGQCQGASRPSCCLHVYSSVYLAMSYTPPSVEY* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0306 537 SMART FIST_C_2 344 500 IPR019494 -
Apr1g0306 537 Pfam FIST C domain 401 498 IPR019494 -
Apr1g0306 537 PANTHER F-BOX ONLY PROTEIN 22 27 536 - -
Apr1g0306 537 SUPERFAMILY F-box domain 27 63 IPR036047 GO:0005515
Apr1g0306 537 Pfam FIST N domain 115 317 IPR013702 -
Apr1g0306 537 SMART fbox_2 31 71 IPR001810 GO:0005515
Apr1g0306 537 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 27 536 - -
Apr1g0306 537 Pfam F-box domain 29 66 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0306 - - gmx:100815778 840.491