Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0297 ATGGCGGCCACCGCTTCGAGAACCCCATTCTCTTCTTCCTCTTCATACCCCAACTTCCCAAAACGCAATGTCAGATTCACTCTCCCACTCTCTCCAACCTTCAACAAACCCAACCCCACACACCCTCTCGGAATCTCATGCTCCCTCTCCAAACCCCCCGCCGCATCCGCCACCACCTCCACCGCCGCCCCCCCCGCCGAGCCCTTTGTCTCGCGCTTTTCCGCCACCGAGCCCCGCAAGGGCTCCGATATCCTCGTGGAGGCGCTGGAGCGGCAGGGCGTCACGACGGTGTTCGCGTACCCCGGCGGCGCGTCGATGGAGATCCACCAAGCTCTCACGCGCTCCCACAGCATCCGGAACGTCCTCCCTCGGCACGAGCAGGGCGGTGCCTTCGCCGCCGAGGGCTACGCGCGCTCCACCGGGCTTCCCGGTGTGTGCATCGCAACCTCCGGGCCCGGTGCCACCAACCTCGTTAGCGGCCTCGCCGACGCCATGATGGACAGCATCCCACTCGTCGCCATCACCGGCCAAGTTCCCCGGAGAATGATCGGCACCGACGCGTTCCAAGAGACCCCAATCGTGGAAGTTACCAGATCCATCACCAAACATAACTATCTCGTTCTGGACGTGGATGACATCCCTAAGGTCGTTAGCGAGGCCTTCTTCGTGGCCACTTCTGGACGGCCCGGCCCAGTTCTCATCGACGTCCCCAAAGACATCCAACAACAGCTTGCTGTTCCTAACTGGGACCAGCCCATTAAGCTCACCGGCTATATTTCCAGGCTGCCCAAGGTTCCCAGCGAGGCCCAATTGGATCAGATTCTGAGGTTAATAATGGAGGCCAAGAAACCGGTTTTGTACGTTGGGGGTGGTTGTTTGAACTCGAGCGTTGAGTTGAGGAGGTTTGTGGAACTCACTGGGATCCCTGTTGCGAGTACGTTGATGGGTCTTGGGGTTTACCCTATTGGAGATGAACATTCCCTTCAAATGTTGGGTATGCATGGCACTGTCTTTGCTAACTATGCTGTTGATAACAGTGATTTGTTGCTTGCCTTTGGGGTAAGGTTTGATGACCGCGTCACTGGGAAACTAGAGGCTTTTGCCAGCAGGGCTAAGATTGTTCACATTGATATTGATTCTGCTGAGATTGGGAAGAATAAGCTGCCACACGTGTCGGTTTGTGCGGATTTGAAAATGGCTTTGGAGGGTATCAATAGGATTTTGGAGAGTAAGGGTGTGAAGGGTAAGCTTGACCTTGAAGCTTGGAGAGAGGAGATTAGTGTGCAGAAACGAAAGTTTCCATTGAGTTATAAGACGTTTGAGGATGGTGTTATTTGTCCTCAGTATGCAATTGAGGTTCTTGATGAGTTGACAAATGGAGATGCTATTATTAGTACTGGTGTTGGACAGCATCAAATGTGGGCTGCACAGTTTTACAAGTACAAGAGGCCTAGGCAGTGGTTAACATCAGGGGGTCTTGGTGCTATGGGGTTTGGATTGCCTGCTGCTATTGGTGCTGCTGTTGCTAACCCTGATGCAATTGTGGTTGATATTGACGGAGATGGTAGTTTCATTATGAATGTTCAGGAGTTGGCAACTATTAGAGTGGAGAATCTCCCTGTAAAGATATTGTTGCTGAATAATCAGCATTTGGGTATGGTGGTTCAGTGGGAGGATCGGTTCTATAAGTCCAATAGAGCTCACACTTATCTGGGAGACCCTTCTAGGGAGACAGAGATATTCCCAAACATGCTTAAGTTTGCTGATGCTTGTGGGATACCTGCTGAACGTGTGACCCACAAAGGAGACTTAAGAGCAGCAATACAGAAAATGTTGGACACCCCCGGCCCTTACCTTCTTGACGTCATTGTACCCCATCAGGAGCATGTCTTGCCAATGATTCCAAGTAATGGATGTTTCAAGGATGTCATAACTGAGGGTGATGGTAGAACGAGGTACTGA 1962 0.5214 MAATASRTPFSSSSSYPNFPKRNVRFTLPLSPTFNKPNPTHPLGISCSLSKPPAASATTSTAAPPAEPFVSRFSATEPRKGSDILVEALERQGVTTVFAYPGGASMEIHQALTRSHSIRNVLPRHEQGGAFAAEGYARSTGLPGVCIATSGPGATNLVSGLADAMMDSIPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKHNYLVLDVDDIPKVVSEAFFVATSGRPGPVLIDVPKDIQQQLAVPNWDQPIKLTGYISRLPKVPSEAQLDQILRLIMEAKKPVLYVGGGCLNSSVELRRFVELTGIPVASTLMGLGVYPIGDEHSLQMLGMHGTVFANYAVDNSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKLPHVSVCADLKMALEGINRILESKGVKGKLDLEAWREEISVQKRKFPLSYKTFEDGVICPQYAIEVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAIGAAVANPDAIVVDIDGDGSFIMNVQELATIRVENLPVKILLLNNQHLGMVVQWEDRFYKSNRAHTYLGDPSRETEIFPNMLKFADACGIPAERVTHKGDLRAAIQKMLDTPGPYLLDVIVPHQEHVLPMIPSNGCFKDVITEGDGRTRY* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0297 653 MobiDBLite consensus disorder prediction 44 65 - -
Apr1g0297 653 CDD TPP_AHAS 445 636 IPR039368 GO:0030976
Apr1g0297 653 Pfam Thiamine pyrophosphate enzyme, central domain 272 402 IPR012000 GO:0000287|GO:0030976
Apr1g0297 653 Gene3D - 271 435 - -
Apr1g0297 653 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 80 243 IPR012001 GO:0030976
Apr1g0297 653 Gene3D - 436 623 - -
Apr1g0297 653 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 47 652 IPR045229 -
Apr1g0297 653 SUPERFAMILY DHS-like NAD/FAD-binding domain 267 434 IPR029035 -
Apr1g0297 653 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 447 644 IPR029061 -
Apr1g0297 653 Gene3D - 69 262 - -
Apr1g0297 653 PANTHER ACETOLACTATE SYNTHASE 47 652 - -
Apr1g0297 653 CDD TPP_PYR_POX_like 83 238 - -
Apr1g0297 653 ProSitePatterns Thiamine pyrophosphate enzymes signature. 504 523 IPR000399 GO:0000287|GO:0030976
Apr1g0297 653 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 467 622 IPR011766 GO:0003824|GO:0030976
Apr1g0297 653 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 80 645 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Apr1g0297 653 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 75 256 IPR029061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0297 Apr-Chr1 3490045 3492753 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0297 K01652 - gmx:100782250 1089.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0297 1 3490045 3492753 Apr1g0297 1 3490045 3492753 ECH