Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0290 ATGGAAGGGATTGTGGGAAATTGCTTGAAACTAAATATGATTTTGCTAATATTGTGCTTCACCAATTTGGGCATCGCTTTTGCTCAAGAGCACATGAGCGGATATGGAGAGCAGCCACTGGCGAAGATTGCCATTCACAAGACCGTTTTGGCGCTCCACAGTTCTGCCTCCATTACAGCATCACCCTTTGTGCTGGGCGAAAAGGATGAGGATACAGCATGGGTGACTGTACAACTGGAGGCACCAGAACCAGCCATTGATGACTGGGTGGGAGTCTTTTCTCCAGGGAACTTCAATTCCTCTCTATGTCCATCTAATGGTGGCGTTGGCCGTGTAGAGCAACCATACATATGCTCGGCTCCAATAAAGTACAAGTATGCAAACCACTCCAATCCAAAGTATACAAAGACCGGGAAAGCTATTTTGAAGTTCCAGTTGATCAACCAACGTGAAGATTTCTCCTTTGCACTATTTTCAGGAGGGTTATCAAATCCCAGACTAGTGGCAGTTTCCAATTCCATAGCATTTGCAAATCCTAAAGCACCCGTGTATCCGCGCCTAGCTCTTGGGAAATCATGGGATGAAATGACAGTTACCTGGACTAGTGGCTATGACATTCATGAAGCTGTGCCGTTTGTTGAATGGGGTCCCATTGGAGGAAGCCAGACACGATCTCCTGCTGGAACGTTGACGTTTAATCGTAACAGCTTGTGTGGTCCACCTGCTAGAACTGTTGGTTGGCGTGACCCCGGTTTTATACACACAAGTTTCCTCAAAGAACTATGGCCAAATTTGAGGTACACATATAGGTTGGGACATATGCTCTCCGATGGTTCTTATGTATGGAGTAAGACGTATTCGTTCAAGGCATCCCCATATCCTGGACAAAACTCATTGCAACGTGTTATCATATTTGGTGACATGGGAAAGGCTGAGCGTGATGGTTCAAATGAATATGCTAACTATCAACCTGGTTCACTTAATACCACCGACCAACTAGTCAAGGATTTAGACAATTATGACATTGTTTTCCACATTGGAGACTTGCCATATGCAAATGGATACATCTCACAGTGGGACCAATTCACAGCTCAAGTGCAAGAGATTTCATCAACAGTGCCTTACATGATTGCAAGTGGAAATCATGAACGTGATTGGCCAAATACTGGATCCTTCTTTGATACTTCGGATTCAGGTGGAGAATGTGGAGTTCCTGCAGAAACCATGTATTATTTTCCTGCTGAGAATAAAGCTAAATTCTGGTATAAAGCAGATTATGGCATGTTTCGTTTTTGTATAGCAGACAGTGAGCATGACTGGAGAGAAGGATCAGAACAGTACAAATTCATTGAACATTGTCTTGCAACAGTAGATAGAAAGCAACAACCATGGTTAATATTTTCAGCTCATCGTCCTCTTGGGTACTCCTCTAATGATTGGTATGGCAAGGAGGGCTCATTTGAAGAGCCTGAGGGAAGGGAACATTTGCAAAAGCTTTGGCAGAAGTACAAAGTAGACATTGCATTTTATGGTCATGTGCACAACTACGAAAGAATCTGCCCCATTTATCAGAACCAATGCGTGAATTCAGAAAAACATCATTACTCTGGGACTGTGAATGGAACAATTCATGTTGTTGTTGGTGGAGCGGGAAGTCACTTGTCAAATTTCGCTGCATCACCCCCAGTTTGGAGTCTTTTCAGGGACCTTGACTTTGGGTTTGGCAAACTCACAGCATTCAACCACTCATATCTCCTTTTTGAGTACAAGAGAAGTAGTGATGGAAATGTTTACGACTTTTTTACCATTTCAAGGGACTACAGAGATGTCTTGGCCTGTGTGCATGATGGTTGTGAGAAAACCACTTTAGCATCCTAA 1878 0.434 MEGIVGNCLKLNMILLILCFTNLGIAFAQEHMSGYGEQPLAKIAIHKTVLALHSSASITASPFVLGEKDEDTAWVTVQLEAPEPAIDDWVGVFSPGNFNSSLCPSNGGVGRVEQPYICSAPIKYKYANHSNPKYTKTGKAILKFQLINQREDFSFALFSGGLSNPRLVAVSNSIAFANPKAPVYPRLALGKSWDEMTVTWTSGYDIHEAVPFVEWGPIGGSQTRSPAGTLTFNRNSLCGPPARTVGWRDPGFIHTSFLKELWPNLRYTYRLGHMLSDGSYVWSKTYSFKASPYPGQNSLQRVIIFGDMGKAERDGSNEYANYQPGSLNTTDQLVKDLDNYDIVFHIGDLPYANGYISQWDQFTAQVQEISSTVPYMIASGNHERDWPNTGSFFDTSDSGGECGVPAETMYYFPAENKAKFWYKADYGMFRFCIADSEHDWREGSEQYKFIEHCLATVDRKQQPWLIFSAHRPLGYSSNDWYGKEGSFEEPEGREHLQKLWQKYKVDIAFYGHVHNYERICPIYQNQCVNSEKHHYSGTVNGTIHVVVGGAGSHLSNFAASPPVWSLFRDLDFGFGKLTAFNHSYLLFEYKRSSDGNVYDFFTISRDYRDVLACVHDGCEKTTLAS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0290 625 Gene3D - 295 609 IPR029052 -
Apr1g0290 625 Pfam Purple acid Phosphatase, N-terminal domain 186 289 IPR015914 GO:0003993|GO:0046872
Apr1g0290 625 PANTHER PURPLE ACID PHOSPHATASE 12 624 - -
Apr1g0290 625 Gene3D - 181 294 - -
Apr1g0290 625 Pfam Calcineurin-like phosphoesterase 301 516 IPR004843 GO:0016787
Apr1g0290 625 CDD MPP_PAPs 300 605 IPR041792 -
Apr1g0290 625 PANTHER PURPLE ACID PHOSPHATASE-RELATED 12 624 - -
Apr1g0290 625 SUPERFAMILY Metallo-dependent phosphatases 301 616 IPR029052 -
Apr1g0290 625 Pfam Fn3-like domain from Purple Acid Phosphatase 58 178 IPR040974 -
Apr1g0290 625 SUPERFAMILY Purple acid phosphatase, N-terminal domain 160 292 IPR008963 GO:0003993|GO:0046872
Apr1g0290 625 Pfam Iron/zinc purple acid phosphatase-like protein C 541 599 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0290 Apr-Chr1 3400077 3406264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr1g0290 49 599 Miscellaneous Gene Families AT1G13900 29.118 1.75e-59 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0290 K22390 - gmx:100775672 1170.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0290 1 3400077 3406264 Apr1g0290 1 3400077 3406264 ECH