Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0289 ATGGCACCGCACGATCTCCGCCGTCCGTTCAAGCGACCGGCGATCTCCGATCAAGAGAGGCGCAGGGAACAGTCTTTGCTCCGCCAAGCACAGAATCGCCGGGACGCTCAGCATCACGCCCGCTTCTTAGTCTCCACCGCCTTCAATCTTCCATCCCAAACCCCCCACACCAACCTCCCCGAACCAGAACCTGAACCCACCGAAACCCCCGAACCTTCGCACACGGACCTCGACGTTCTCGAGGCCTCGAAGCTGAAACCCTCAGAGGCTCGCAAATGGTTCGCCAAACAGCTCATGCTCCCCGAATGGATGATCGACATTCCCAACAACCTCTCACAAGACTGGTTTGTTTTCGCTCGTCCCTCGGGTAAACGCTGTTTTGTCGTTTCGTGTAATGGAACGACTATAAGCCGTTTGCGTAACGGTTCCATTCTGCACCGTTTTCCCTCTGCGTTGCCGAATGGGGCAAGGAAGAAGGACTCTTCCTCTGGTTCTTCTCAGTCTTACTCTATATTGGACTGCATCTTTCACGAGATGGATCAAACTTACTATGTTATTGACATGGTTTGTTGGCGGGGATATTCGTTGTATGATTGCACTGCGGAGTTCAGGTTCTTCTGGTTGAACTCCAAGCTCGCAGAGACTGGTGCTTGTGACCCTCCCTCGCATTATCACAAGTACAAGTTCAGTTTGGTTCCGGTATATGGTTGTGACCGGAACGGCCTCCATGCGGCTTATACGGCACCGCTGCCTTATGTCAAAGATGGTCTTCTATTTTATAACAAGCATGCGCACTACGAGGCAGGAATTACGCCATTAGCGTTAGTTTGGAAGGATGAAAACTGTAGTCAATATGTTATGGACACAGACAGTAAAGGACAGGTTCCAAACCAACAGCAGGTGGTTTTGGAGTTTCAAGAAGATGGAAAACTGACTACCTCTGATGATCCTCCAGTGGTTTTTGGCTGTTTAGATGGAAGTTTTACAGAACAGTCAGGGCTGCATTCAGGATGTCTTCTACGGTTTACAATTGGAGAGGGAGGATTGGTTTTGATGGATGGGAAGCTTGAGAATGCTGATCTAAATTATCTTGGCCAGGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATACAGTGTTAGACACTCCCCCCTCAGGATTGATGATCTGTTGGGATCTGTCAGTTCACCAGTTGATCAAGAAAGCAAACCTTGTGATATTGAGATGGATGGTTGA 1254 0.4928 MAPHDLRRPFKRPAISDQERRREQSLLRQAQNRRDAQHHARFLVSTAFNLPSQTPHTNLPEPEPEPTETPEPSHTDLDVLEASKLKPSEARKWFAKQLMLPEWMIDIPNNLSQDWFVFARPSGKRCFVVSCNGTTISRLRNGSILHRFPSALPNGARKKDSSSGSSQSYSILDCIFHEMDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDPPSHYHKYKFSLVPVYGCDRNGLHAAYTAPLPYVKDGLLFYNKHAHYEAGITPLALVWKDENCSQYVMDTDSKGQVPNQQQVVLEFQEDGKLTTSDDPPVVFGCLDGSFTEQSGLHSGCLLRFTIGEGGLVLMDGKLENADLNYLGQANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVSSPVDQESKPCDIEMDG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0289 417 MobiDBLite consensus disorder prediction 1 40 - -
Apr1g0289 417 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 416 IPR017336 GO:0005634|GO:0005737|GO:0061015
Apr1g0289 417 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 93 278 - -
Apr1g0289 417 MobiDBLite consensus disorder prediction 1 75 - -
Apr1g0289 417 CDD Snurportin-1_C 93 280 - -
Apr1g0289 417 Gene3D DNA ligase/mRNA capping enzyme 2 305 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0289 K13151 - gmx:100801927 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0289 1 3372765 3377966 Apr1g0289 1 3372765 3377966 ECH