Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr1g0274 ATGGCGAAGCAAGAGAGCCCCGACATAGTTTCCGATTTCATCAACTTCCTCAACGCTTCTCCCACTGCTTTCCACGCTGTCGACGAGGCGAAGAAGCGTTTGCGAAGCGCGGGGTTCGAACAACTCTCGGAGAGGGAAGTGTGGGAACTGCAACCCGGCAACAAGTACTTCTTCACCAGAAACTACTCCACCATTGTCGCCTTCGCTATCGGCAAAAGGTACGTTGCTGGAAATGGATTCCACATAATTGGGGCTCACACGGATAGTCCTTCTTTGAAGCTGAAGCCCGTCACCAAGGTTGTTAAGGGTGGAATTTTGGAGGTTGGTGTCCAATTATATGGGGGTGGTTTGTGGCATACGTGGTTCGATCGTGACCTGACTGTGGCTGGGAGGGTCCTTGTGCGAGAAGAGAATGCAGGTTCTGAATCATACTCACATCGCCTTGTTAGAATTGAGGAGCCTATAATACGGATCCCGACATTGGCTATTCACTTGGACAGGACTGTTAATGATGATGGATTCAAATTTAACACACAGACTCATCTTCTTCCCGTATTGGCAACAGCACTAAAGGGAGAGGTCAATAAAGTGTCCTCTGAAAATGGTCCAGTTGAAAGTGGAAATCAAACTGATGGAAAGAAATCAAATGATAAATCAGACACCAGCAATACAAAGCACCACCTTCTTCTTCTACAGTTGCTTGCAAATAAACTCGGGTGTGAACCAAATGACATTTGTGATTTTGAATTGCAAGCTTGCGATACTCAACCAAGTGTTGTTGCTGGAGCTGCTAAGGAATTCATTTTTTCAGGACGGCTTGATAACCTCTGCATGTCATTTTGCTCACTGAAGGCATTAATAGATGCAACATCCTCTGACAGAAGTCTTGAGGAAGAGACTGGCATTAGAATGGTGGCTTTGTTTGACCATGAGGAAGTTGGATCTGATTCTGCACAAGGAGCTGGCTCTCCTGTTATGCTAACTGCTTTGTCCAGGGTTACATATTCCTTCAGCTCAAATTCCAACCTGCTGGAGAAAGCGGTACAAAGAAGCTTCCTTGTATCTGCCGATATGGCACATGCACTTCACCCCAATTACATGGAGAAGCATGAAGAAAATCATCAGCCTAAACTACATGGAGGACTTGTCATTAAAAACAATGCAGGTCAACGCTACGCAACCAATGCTGTCACTTCCTTTATATTCAGGGAGATAGCATCAAAGCATAACCTTCCCGTTCAGGACTTTGTGGTGCGCAATGACATGTCTTGTGGCACAACCATTGGTCCTATTCTTGCCAGTGGCGTAGGTGTTCGAACTGTTGACGTCGGTGCACCGCAATTGTCAATGCATAGCATACGAGAAATGTGTGCTATTGATGATGTGAAGTATTCATACGAGCATTTCAAGGCCTTTTACCTTGAATTCTCTCACCTCGATGCTAAGATTGCCGTTGACATGTAG 1464 0.4556 MAKQESPDIVSDFINFLNASPTAFHAVDEAKKRLRSAGFEQLSEREVWELQPGNKYFFTRNYSTIVAFAIGKRYVAGNGFHIIGAHTDSPSLKLKPVTKVVKGGILEVGVQLYGGGLWHTWFDRDLTVAGRVLVREENAGSESYSHRLVRIEEPIIRIPTLAIHLDRTVNDDGFKFNTQTHLLPVLATALKGEVNKVSSENGPVESGNQTDGKKSNDKSDTSNTKHHLLLLQLLANKLGCEPNDICDFELQACDTQPSVVAGAAKEFIFSGRLDNLCMSFCSLKALIDATSSDRSLEEETGIRMVALFDHEEVGSDSAQGAGSPVMLTALSRVTYSFSSNSNLLEKAVQRSFLVSADMAHALHPNYMEKHEENHQPKLHGGLVIKNNAGQRYATNAVTSFIFREIASKHNLPVQDFVVRNDMSCGTTIGPILASGVGVRTVDVGAPQLSMHSIREMCAIDDVKYSYEHFKAFYLEFSHLDAKIAVDM* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr1g0274 487 Pfam Aminopeptidase I zinc metalloprotease (M18) 16 473 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 CDD M18_DAP 12 473 - -
Apr1g0274 487 Gene3D Zn peptidases 12 473 - -
Apr1g0274 487 PANTHER ASPARTYL AMINOPEPTIDASE 3 486 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 PANTHER ASPARTYL AMINOPEPTIDASE 3 486 - -
Apr1g0274 487 Gene3D Aminopeptidase i, Domain 2 91 257 IPR023358 GO:0004177
Apr1g0274 487 SUPERFAMILY Zn-dependent exopeptidases 5 473 - -
Apr1g0274 487 SUPERFAMILY Aminopeptidase/glucanase lid domain 92 251 - -
Apr1g0274 487 MobiDBLite consensus disorder prediction 197 222 - -
Apr1g0274 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 80 96 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 113 133 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 308 326 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 351 367 IPR001948 GO:0004177|GO:0006508|GO:0008270
Apr1g0274 487 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 440 455 IPR001948 GO:0004177|GO:0006508|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr1g0274 Apr-Chr1 3191060 3196000 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr1g0274 K01267 - gmx:100781379 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr1g0274 1 3191060 3196000 Apr1g0274 1 3191060 3196000 ECH